CCP43383 (rplK, Rv0640)

Aliases : rplK, Rv0640

Description : 50S ribosomal protein L11 RplK [Ensembl]. Ribosomal protein L11 [Interproscan].

Gene families : OG_02_0000363 (OrthoFinder) Phylogenetic Tree(s): OG0000363_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: CCP43383
Cluster	HCCA: Cluster_25

Target	Alias	Description	ECC score	Gene Family Method
AAC76957	rplK, b3983	50S ribosomal subunit protein L11 [Ensembl]. Ribosomal...	0.17	OrthoFinder
AAK99359	spr0555, rplK	50S Ribosomal protein L11 [Ensembl]. Ribosomal protein...	0.07	OrthoFinder
AAL22977	STM4149, rplK	50 S ribosomal subunit protein L11 [Ensembl]. Ribosomal...	0.16	OrthoFinder
ADK86752	rplK, MPNE_0251	ribosomal protein L11 [Ensembl]. Ribosomal protein L11...	0.12	OrthoFinder
AEA94770	rplK, OG1RF_12083	50S ribosomal protein L11 [Ensembl]. Ribosomal protein...	0.08	OrthoFinder
AGT26521	N559_4937	50S ribosomal protein L11 [Ensembl]. RNA binding domain,...	0.06	OrthoFinder
AHY39727	rplK, CJ8421_02370	50S ribosomal protein L11 [Ensembl]. Ribosomal protein...	0.16	OrthoFinder
AKI48215	rplK, L2625_00265	ribosomal protein L11 [Ensembl]. Ribosomal protein L11...	0.05	OrthoFinder
AKP15107	rplK, WX61_01053	50S ribosomal protein L11 [Ensembl]. Ribosomal protein...	0.11	OrthoFinder
CBI65846	rplK, HPB8_289	large subunit ribosomal protein L11 [Ensembl]. Ribosomal...	0.02	OrthoFinder
CCG26741	No alias	LSU ribosomal protein L11p (L12e) [Ensembl]. Ribosomal...	0.07	OrthoFinder
CCL20639	rplK, BN171_80004	50S ribosomal protein L11 [Ensembl]. Ribosomal protein...	0.09	OrthoFinder
CPC57428	rplK, ERS093114_00842	50S ribosomal protein L11 [Ensembl]. Ribosomal protein...	0.24	OrthoFinder
CRO73449	rplK	50S ribosomal protein L11 [Ensembl]. Ribosomal protein...	0.18	OrthoFinder
EDJ91477	CGSHi22421_06897	50S ribosomal protein L11 [Ensembl]. Ribosomal protein...	0.09	OrthoFinder
KNA49132	VCV51_033812	ribosomal protein L11 [Ensembl]. Ribosomal protein L11...	0.14	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	Enrichment
MF	GO:0003723	RNA binding	IEP	Enrichment
MF	GO:0003743	translation initiation factor activity	IEP	Enrichment
MF	GO:0003746	translation elongation factor activity	IEP	Enrichment
MF	GO:0003899	DNA-directed 5'-3' RNA polymerase activity	IEP	Enrichment
MF	GO:0003916	DNA topoisomerase activity	IEP	Enrichment
MF	GO:0003918	DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity	IEP	Enrichment
MF	GO:0005488	binding	IEP	Enrichment
BP	GO:0006265	DNA topological change	IEP	Enrichment
BP	GO:0006351	transcription, DNA-templated	IEP	Enrichment
BP	GO:0006413	translational initiation	IEP	Enrichment
BP	GO:0006414	translational elongation	IEP	Enrichment
BP	GO:0006996	organelle organization	IEP	Enrichment
MF	GO:0008135	translation factor activity, RNA binding	IEP	Enrichment
MF	GO:0019843	rRNA binding	IEP	Enrichment
MF	GO:0032977	membrane insertase activity	IEP	Enrichment
MF	GO:0034062	5'-3' RNA polymerase activity	IEP	Enrichment
MF	GO:0045182	translation regulator activity	IEP	Enrichment
BP	GO:0051276	chromosome organization	IEP	Enrichment
BP	GO:0071103	DNA conformation change	IEP	Enrichment
MF	GO:0090079	translation regulator activity, nucleic acid binding	IEP	Enrichment
MF	GO:0097159	organic cyclic compound binding	IEP	Enrichment
BP	GO:0097659	nucleic acid-templated transcription	IEP	Enrichment
MF	GO:0097747	RNA polymerase activity	IEP	Enrichment
MF	GO:0140104	molecular carrier activity	IEP	Enrichment
MF	GO:0140597	protein carrier activity	IEP	Enrichment
MF	GO:1901363	heterocyclic compound binding	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR020784	Ribosomal_L11_N	4	68
IPR020783	Ribosomal_L11_C	73	141

External Links

No external refs found!

CCP43383 (rplK, Rv0640)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation