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CCP46215 (Rv3394c)


Aliases : Rv3394c

Description : Conserved hypothetical protein [Ensembl]. impB/mucB/samB family [Interproscan].


Gene families : OG_02_0000571 (OrthoFinder) Phylogenetic Tree(s): OG0000571_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCP46215
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AAC73335 dinB, b0231 DNA polymerase IV [Ensembl]. IMS family HHH motif,... 0.04 OrthoFinder
AAL19270 STM0313, dinP DNA polymerase IV [Ensembl]. IMS family HHH motif,... 0.01 OrthoFinder
AGT25799 N559_4174 DNA polymerase IV [Ensembl]. impB/mucB/samB family... 0.04 OrthoFinder
CPD02875 dinB, ERS093114_01863 DNA polymerase IV [Ensembl]. impB/mucB/samB family... 0.02 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0006281 DNA repair IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000150 DNA strand exchange activity IEP Enrichment
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003678 DNA helicase activity IEP Enrichment
MF GO:0003697 single-stranded DNA binding IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003906 DNA-(apurinic or apyrimidinic site) endonuclease activity IEP Enrichment
MF GO:0004371 glycerone kinase activity IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
MF GO:0004518 nuclease activity IEP Enrichment
MF GO:0004519 endonuclease activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0006071 glycerol metabolic process IEP Enrichment
BP GO:0006282 regulation of DNA repair IEP Enrichment
BP GO:0006289 nucleotide-excision repair IEP Enrichment
BP GO:0006310 DNA recombination IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
MF GO:0008716 D-alanine-D-alanine ligase activity IEP Enrichment
MF GO:0009378 four-way junction helicase activity IEP Enrichment
CC GO:0009379 Holliday junction helicase complex IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
BP GO:0018142 protein-DNA covalent cross-linking IEP Enrichment
BP GO:0018143 nucleic acid-protein covalent cross-linking IEP Enrichment
BP GO:0019400 alditol metabolic process IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
CC GO:0033202 DNA helicase complex IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0048583 regulation of response to stimulus IEP Enrichment
BP GO:0051052 regulation of DNA metabolic process IEP Enrichment
BP GO:0080134 regulation of response to stress IEP Enrichment
BP GO:0080135 regulation of cellular response to stress IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:2001020 regulation of response to DNA damage stimulus IEP Enrichment
InterPro domains Description Start Stop
IPR001126 UmuC 19 147
UniProtKB O50419