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  5. CCL20589

CCL20589 (rpsK, BN171_70029)


Aliases : rpsK, BN171_70029

Description : 30S ribosomal protein S11 [Ensembl]. Ribosomal protein S11 [Interproscan].


Gene families : OG_02_0000561 (OrthoFinder) Phylogenetic Tree(s): OG0000561_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCL20589
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
AAC76322 rpsK, b3297 30S ribosomal subunit protein S11 [Ensembl]. Ribosomal... 0.24 OrthoFinder
AAK99018 spr0214, rpsK 30S Ribosomal protein S11 [Ensembl]. Ribosomal protein... 0.17 OrthoFinder
AAL22280 STM3417, rpsK 30S ribosomal subunit protein S11 [Ensembl]. Ribosomal... 0.24 OrthoFinder
ADK86660 rpsK, MPNE_0219 30S ribosomal protein S11 [Ensembl]. 0.16 OrthoFinder
AEA92863 rpsK, OG1RF_10176 30S ribosomal protein S11 [Ensembl]. Ribosomal protein... 0.29 OrthoFinder
AHY40766 CJ8421_07970 30S ribosomal protein S11 [Ensembl]. Ribosomal protein... 0.16 OrthoFinder
AKI50542 rpsK, L2625_02752 ribosomal protein S11 [Ensembl]. Ribosomal protein S11... 0.21 OrthoFinder
CBI65741 rpsK, HPB8_184 small subunit ribosomal protein S11 [Ensembl]. Ribosomal... 0.14 OrthoFinder
CCG27404 No alias SSU ribosomal protein S11p (S14e) [Ensembl]. Ribosomal... 0.15 OrthoFinder
CCP46281 rpsK, Rv3459c 30S ribosomal protein S11 RpsK [Ensembl]. Ribosomal... 0.15 OrthoFinder
CPD14353 rpsK, ERS093114_02147 30S ribosomal protein S11 [Ensembl]. Ribosomal protein... 0.28 OrthoFinder
CRO74429 rpsK 30S ribosomal protein S11 [Ensembl]. Ribosomal protein... 0.21 OrthoFinder
EDJ91379 CGSHi22421_04728 30S ribosomal protein S11 [Ensembl]. Ribosomal protein... 0.19 OrthoFinder
KNA54995 VCV51_033178 30S ribosomal protein S11 [Ensembl]. Ribosomal protein... 0.17 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0003941 L-serine ammonia-lyase activity IEP Enrichment
MF GO:0004813 alanine-tRNA ligase activity IEP Enrichment
MF GO:0004820 glycine-tRNA ligase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
BP GO:0006094 gluconeogenesis IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006419 alanyl-tRNA aminoacylation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0016051 carbohydrate biosynthetic process IEP Enrichment
MF GO:0016840 carbon-nitrogen lyase activity IEP Enrichment
MF GO:0016841 ammonia-lyase activity IEP Enrichment
BP GO:0019319 hexose biosynthetic process IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:0046364 monosaccharide biosynthetic process IEP Enrichment
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR001971 Ribosomal_S11 22 131
UniProtKB U3X678