CRN72185 (baeR_1)

Aliases : baeR_1

Description : Transcriptional regulatory protein BaeR [Ensembl]. Response regulator receiver domain, Transcriptional regulatory protein [Interproscan].

Gene families : OG_02_0000001 (OrthoFinder) Phylogenetic Tree(s): OG0000001_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: CRN72185
Cluster	HCCA: Cluster_18

Target	Alias	Description	ECC score	Gene Family Method
AAC76061	qseB, b3025	quorum sensing DNA-binding response regulator in...	0.05	OrthoFinder
AAL00695	spr1893, phoP	Response regulator [Ensembl]. Transcriptional regulatory...	0.02	OrthoFinder
AAL22051	STM3177, ygiX	putative transcriptional regulator [Ensembl]. Response...	0.03	OrthoFinder
AAL22899	STM4059, cpxR	response reguator in two-component regulatory system...	0.02	OrthoFinder
CPC31435	arlR, ERS093114_00002	Putative response regulator ArlR [Ensembl]....	0.03	OrthoFinder
CPC70217	vicR, ERS093114_01104	Two-component response regulator [Ensembl]....	0.04	OrthoFinder
CRO52494	czcR_1	Transcriptional activator protein CzcR [Ensembl]....	0.05	OrthoFinder
CRP58313	czcR_4	Transcriptional activator protein CzcR [Ensembl]....	0.04	OrthoFinder
EDJ90310	CGSHi22421_02241	transcriptional regulatory protein [Ensembl]....	0.04	OrthoFinder

Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0035556	intracellular signal transduction	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	IEP	Enrichment
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Enrichment
MF	GO:0004392	heme oxygenase (decyclizing) activity	IEP	Enrichment
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	Enrichment
BP	GO:0006352	DNA-templated transcription, initiation	IEP	Enrichment
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	Enrichment
BP	GO:0006778	porphyrin-containing compound metabolic process	IEP	Enrichment
BP	GO:0006788	heme oxidation	IEP	Enrichment
BP	GO:0006807	nitrogen compound metabolic process	IEP	Enrichment
BP	GO:0006826	iron ion transport	IEP	Enrichment
BP	GO:0008152	metabolic process	IEP	Enrichment
BP	GO:0009058	biosynthetic process	IEP	Enrichment
BP	GO:0009059	macromolecule biosynthetic process	IEP	Enrichment
BP	GO:0016070	RNA metabolic process	IEP	Enrichment
MF	GO:0016987	sigma factor activity	IEP	Enrichment
BP	GO:0018130	heterocycle biosynthetic process	IEP	Enrichment
BP	GO:0019438	aromatic compound biosynthetic process	IEP	Enrichment
BP	GO:0032774	RNA biosynthetic process	IEP	Enrichment
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	Enrichment
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	Enrichment
BP	GO:0042168	heme metabolic process	IEP	Enrichment
BP	GO:0042440	pigment metabolic process	IEP	Enrichment
BP	GO:0043170	macromolecule metabolic process	IEP	Enrichment
BP	GO:0044237	cellular metabolic process	IEP	Enrichment
BP	GO:0044238	primary metabolic process	IEP	Enrichment
BP	GO:0044249	cellular biosynthetic process	IEP	Enrichment
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	Enrichment
BP	GO:0046483	heterocycle metabolic process	IEP	Enrichment
BP	GO:0071704	organic substance metabolic process	IEP	Enrichment
BP	GO:0090304	nucleic acid metabolic process	IEP	Enrichment
MF	GO:0140110	transcription regulator activity	IEP	Enrichment
BP	GO:1901360	organic cyclic compound metabolic process	IEP	Enrichment
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	Enrichment
BP	GO:1901576	organic substance biosynthetic process	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR001789	Sig_transdc_resp-reg_receiver	12	119
IPR001867	OmpR/PhoB-type_DNA-bd	164	235

External Links

Locus_tag	PAERUG_E11_London_26_VIM_2_06_13_00350

CRN72185 (baeR_1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation