CRO52826 (fecI_5)


Aliases : fecI_5

Description : putative RNA polymerase sigma factor FecI [Ensembl]. Sigma-70 region 2 [Interproscan].


Gene families : OG_02_0000897 (OrthoFinder) Phylogenetic Tree(s): OG0000897_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CRO52826
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
AAC77249 fecI, b4293 RNA polymerase sigma-19 factor, fec operon-specific; ECF... 0.06 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006352 DNA-templated transcription, initiation IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
MF GO:0016987 sigma factor activity IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Enrichment
MF GO:0000295 adenine nucleotide transmembrane transporter activity IEP Enrichment
MF GO:0003933 GTP cyclohydrolase activity IEP Enrichment
MF GO:0004392 heme oxygenase (decyclizing) activity IEP Enrichment
MF GO:0004784 superoxide dismutase activity IEP Enrichment
MF GO:0005346 purine ribonucleotide transmembrane transporter activity IEP Enrichment
BP GO:0006788 heme oxidation IEP Enrichment
BP GO:0006801 superoxide metabolic process IEP Enrichment
BP GO:0006812 cation transport IEP Enrichment
BP GO:0006826 iron ion transport IEP Enrichment
MF GO:0008521 acetyl-CoA transmembrane transporter activity IEP Enrichment
MF GO:0008849 enterochelin esterase activity IEP Enrichment
BP GO:0009309 amine biosynthetic process IEP Enrichment
MF GO:0015215 nucleotide transmembrane transporter activity IEP Enrichment
MF GO:0015216 purine nucleotide transmembrane transporter activity IEP Enrichment
MF GO:0015605 organophosphate ester transmembrane transporter activity IEP Enrichment
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Enrichment
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Enrichment
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
MF GO:0019238 cyclohydrolase activity IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
MF GO:0030410 nicotianamine synthase activity IEP Enrichment
BP GO:0030417 nicotianamine metabolic process IEP Enrichment
BP GO:0030418 nicotianamine biosynthetic process IEP Enrichment
BP GO:0042168 heme metabolic process IEP Enrichment
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Enrichment
MF GO:0042887 amide transmembrane transporter activity IEP Enrichment
BP GO:0046417 chorismate metabolic process IEP Enrichment
MF GO:0071077 adenosine 3',5'-bisphosphate transmembrane transporter activity IEP Enrichment
BP GO:0072350 tricarboxylic acid metabolic process IEP Enrichment
BP GO:0072351 tricarboxylic acid biosynthetic process IEP Enrichment
BP GO:0072593 reactive oxygen species metabolic process IEP Enrichment
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR013249 RNA_pol_sigma70_r4_t2 119 170
IPR007627 RNA_pol_sigma70_r2 18 88