Aliases : OG1RF_10137
Description : ABC superfamily ATP binding cassette transporter, ABC protein [Ensembl]. ABC transporter [Interproscan].
Gene families : OG_02_0000025 (OrthoFinder) Phylogenetic Tree(s): OG0000025_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AEA92824 | |
Cluster | HCCA: Cluster_11 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AGT26710 | N559_5136, FecE | iron(III) dicitrate ABC transporter, ATP-binding protein... | 0.02 | OrthoFinder | |
AHY40549 | CJ8421_06790 | enterochelin ABC transporter, ATP-binding protein... | 0.02 | OrthoFinder | |
AKI48123 | L2625_00150 | zinc ABC transporter, ATP-binding protein [Ensembl]. ABC... | 0.03 | OrthoFinder | |
AKI49444 | zurA, L2625_01545 | zinc ABC transporter, ATP-binding protein [Ensembl]. ABC... | 0.04 | OrthoFinder | |
CCG27596 | No alias | Heme ABC transporter (Streptococcus), ATP-binding... | 0.03 | OrthoFinder | |
CRO60564 | yusV | putative siderophore transport system ATP-binding... | 0.01 | OrthoFinder | |
CRP72758 | znuC_2 | Zinc import ATP-binding protein ZnuC [Ensembl]. ABC... | 0.03 | OrthoFinder | |
EDJ90088 | CGSHi22421_06578 | iron (chelated) transporter ATP-binding protein... | 0.03 | OrthoFinder | |
KNA56891 | VCV51_030526 | vibriobactin and enterobactin ABC transporter... | 0.02 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005524 | ATP binding | IEA | Interproscan |
MF | GO:0016887 | ATPase | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0001216 | DNA-binding transcription activator activity | IEP | Enrichment |
MF | GO:0003677 | DNA binding | IEP | Enrichment |
MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Enrichment |
MF | GO:0004565 | beta-galactosidase activity | IEP | Enrichment |
MF | GO:0005515 | protein binding | IEP | Enrichment |
BP | GO:0006352 | DNA-templated transcription, initiation | IEP | Enrichment |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Enrichment |
CC | GO:0009341 | beta-galactosidase complex | IEP | Enrichment |
BP | GO:0009889 | regulation of biosynthetic process | IEP | Enrichment |
BP | GO:0010468 | regulation of gene expression | IEP | Enrichment |
BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Enrichment |
MF | GO:0015925 | galactosidase activity | IEP | Enrichment |
MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | Enrichment |
MF | GO:0016987 | sigma factor activity | IEP | Enrichment |
BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Enrichment |
BP | GO:0019222 | regulation of metabolic process | IEP | Enrichment |
BP | GO:0019438 | aromatic compound biosynthetic process | IEP | Enrichment |
BP | GO:0031323 | regulation of cellular metabolic process | IEP | Enrichment |
BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Enrichment |
BP | GO:0032774 | RNA biosynthetic process | IEP | Enrichment |
BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | Enrichment |
BP | GO:0050789 | regulation of biological process | IEP | Enrichment |
BP | GO:0050794 | regulation of cellular process | IEP | Enrichment |
BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Enrichment |
BP | GO:0051252 | regulation of RNA metabolic process | IEP | Enrichment |
BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Enrichment |
BP | GO:0065007 | biological regulation | IEP | Enrichment |
BP | GO:0080090 | regulation of primary metabolic process | IEP | Enrichment |
MF | GO:0140110 | transcription regulator activity | IEP | Enrichment |
BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Enrichment |
BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Enrichment |
BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR003439 | ABC_transporter-like_ATP-bd | 24 | 169 |
No external refs found! |