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  5. CRO83835

CRO83835 (cph2_5)


Aliases : cph2_5

Description : Bacteriophytochrome cph2 [Ensembl]. PAS fold, PAS domain, EAL domain, Diguanylate cyclase, Bacterial extracellular solute-binding proteins [Interproscan].


Gene families : OG_02_0000015 (OrthoFinder) Phylogenetic Tree(s): OG0000015_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CRO83835
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
AAC73920 pdeI, b0833 putative membrane-anchored cyclic-di-GMP... 0.05 OrthoFinder
AAC74252 pdeG, b1168 putative membrane-anchored cyclic-di-GMP... 0.03 OrthoFinder
AAC74562 dosP, b1489 oxygen sensor, c-di-GMP phosphodiesterase,... 0.03 OrthoFinder
CCL16934 BN171_1020001 Putative diguanylate kinase signaling protein [Ensembl].... 0.04 OrthoFinder
CCL17715 BN171_1700002 Putative diguanylate kinase signaling protein [Ensembl].... 0.03 OrthoFinder
CCL17740 BN171_1750001 Putative signaling protein [Ensembl]. Diguanylate... 0.02 OrthoFinder
CCL19125 BN171_2870055 Putative signaling protein [Ensembl]. Diguanylate... 0.02 OrthoFinder
CCL19229 BN171_2970008 Putative signaling protein [Ensembl]. Diguanylate... 0.02 OrthoFinder
CCL19398 BN171_3100004 Putative signaling protein [Ensembl]. Diguanylate... 0.04 OrthoFinder
KNA51140 VCV51_033633 GGDEF domain-containing protein [Ensembl]. Diguanylate... 0.05 OrthoFinder
KNA53931 VCV51_030854 EAL domain-containing protein [Ensembl]. EAL domain,... 0.02 OrthoFinder
KNA54673 VCV51_030759 EAL domain-containing protein [Ensembl]. EAL domain,... 0.05 OrthoFinder
KNA55085 VCV51_031848 EAL domain-containing protein [Ensembl]. EAL domain,... 0.07 OrthoFinder
KNA57618 VCV51_030428 EAL domain-containing protein [Ensembl]. EAL domain,... 0.03 OrthoFinder
KNA58560 VCV51_031144 EAL domain-containing protein [Ensembl]. EAL domain, PAS... 0.04 OrthoFinder
KNA59389 VCV51_031301 EAL domain-containing protein [Ensembl]. EAL domain,... 0.05 OrthoFinder
KNA59789 VCV51_032484 EAL domain-containing protein [Ensembl]. GAF domain, EAL... 0.05 OrthoFinder
KNA60571 VCV51_032242 EAL domain-containing protein [Ensembl]. EAL domain,... 0.04 OrthoFinder
KNA60689 VCV51_032128 EAL domain-containing protein [Ensembl]. EAL domain... 0.03 OrthoFinder
KNA60707 VCV51_032146 EAL domain-containing protein [Ensembl]. EAL domain,... 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Enrichment
BP GO:0003333 amino acid transmembrane transport IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0004673 protein histidine kinase activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005216 ion channel activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008643 carbohydrate transport IEP Enrichment
BP GO:0009297 pilus assembly IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
MF GO:0015288 porin activity IEP Enrichment
MF GO:0015473 fimbrial usher porin activity IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
MF GO:0022829 wide pore channel activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
BP GO:0030030 cell projection organization IEP Enrichment
BP GO:0030031 cell projection assembly IEP Enrichment
CC GO:0042597 periplasmic space IEP Enrichment
BP GO:0043711 pilus organization IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
MF GO:0140299 small molecule sensor activity IEP Enrichment
BP GO:1903825 organic acid transmembrane transport IEP Enrichment
BP GO:1905039 carboxylic acid transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR013655 PAS_fold_3 336 408
IPR001638 Solute-binding_3/MltF_N 39 256
IPR001633 EAL_dom 985 1220
IPR000160 GGDEF_dom 808 965
IPR000014 PAS 694 795
IPR000014 PAS 572 674
IPR000014 PAS 448 548
Locus_tag PAERUG_E11_London_26_VIM_2_06_13_03593