CRO87324 (clpC_2)

Aliases : clpC_2

Description : Negative regulator of genetic competence ClpC/MecB [Ensembl]. C-terminal, AAA lid domain, Clp amino terminal domain, AAA domain (Cdc48 subfamily), ATPase family associated with various cellular activities (AAA) [Interproscan].

Gene families : OG_02_0000042 (OrthoFinder) Phylogenetic Tree(s): OG0000042_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: CRO87324
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
AKP15926 clpB, WX61_01896 Chaperone protein ClpB [Ensembl]. C-terminal, AAA lid... 0.04 OrthoFinder
CBI66855 clpB, HPB8_1298 ATP-dependent Clp protease ATP-binding subunit ClpB... 0.02 OrthoFinder
CRP71014 clpC_3 ATP-dependent Clp protease ATP-binding subunit ClpC... 0.04 OrthoFinder
KNA53871 VCV51_030809, ClpA ATP-dependent Clp protease ATP-binding subunit ClpA... 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004096 catalase activity IEP Enrichment
MF GO:0004601 peroxidase activity IEP Enrichment
BP GO:0009061 anaerobic respiration IEP Enrichment
CC GO:0015627 type II protein secretion system complex IEP Enrichment
BP GO:0015628 protein secretion by the type II secretion system IEP Enrichment
BP GO:0015980 energy derivation by oxidation of organic compounds IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016832 aldehyde-lyase activity IEP Enrichment
MF GO:0016846 carbon-sulfur lyase activity IEP Enrichment
MF GO:0020037 heme binding IEP Enrichment
MF GO:0043546 molybdopterin cofactor binding IEP Enrichment
BP GO:0045333 cellular respiration IEP Enrichment
MF GO:0046906 tetrapyrrole binding IEP Enrichment
BP GO:0098776 protein transport across the cell outer membrane IEP Enrichment
InterPro domains Description Start Stop
IPR041546 ClpA/ClpB_AAA_lid 427 524
IPR004176 Clp_R_dom 100 147
IPR004176 Clp_R_dom 175 226
IPR003959 ATPase_AAA_core 620 788
IPR019489 Clp_ATPase_C 794 873
IPR003959 ATPase_AAA_core 286 419