CRP36529 (rpfC_2)

Aliases : rpfC_2

Description : Sensory/regulatory protein RpfC [Ensembl]. Histidine kinase-, 7TMR-DISM extracellular 2, Response regulator receiver domain, 7TM diverse intracellular signalling, His Kinase A (phospho-acceptor) domain [Interproscan].

Gene families : OG_02_0000000 (OrthoFinder) Phylogenetic Tree(s): OG0000000_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: CRP36529
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
AAC75609 glrK, b2556 sensor protein kinase regulating glmY sRNA in... 0.04 OrthoFinder
AAK99909 spr1106, hk02 Histidine kinase [Ensembl]. PAS fold, Histidine kinase-,... 0.02 OrthoFinder
AGT23479 N559_1738 hypothetical protein [Ensembl]. His Kinase A... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEA Interproscan
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
BP GO:0007165 signal transduction IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000746 conjugation IEP Enrichment
MF GO:0003909 DNA ligase activity IEP Enrichment
MF GO:0003911 DNA ligase (NAD+) activity IEP Enrichment
MF GO:0004392 heme oxygenase (decyclizing) activity IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006778 porphyrin-containing compound metabolic process IEP Enrichment
BP GO:0006788 heme oxidation IEP Enrichment
BP GO:0009291 unidirectional conjugation IEP Enrichment
BP GO:0009292 genetic transfer IEP Enrichment
MF GO:0015399 primary active transmembrane transporter activity IEP Enrichment
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Enrichment
BP GO:0042168 heme metabolic process IEP Enrichment
BP GO:0042440 pigment metabolic process IEP Enrichment
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Enrichment
BP GO:0044764 multi-organism cellular process IEP Enrichment
BP GO:0051704 multi-organism process IEP Enrichment
InterPro domains Description Start Stop
IPR011622 7TMR_DISM_rcpt_extracell_dom2 32 171
IPR011623 7TMR_DISM_rcpt_extracell_dom1 184 386
IPR003661 HisK_dim/P 419 482
IPR001789 Sig_transdc_resp-reg_receiver 670 780
IPR003594 HATPase_C 530 644