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CRP49890 (rfbD_2)


Aliases : rfbD_2

Description : dTDP-4-dehydrorhamnose reductase [Ensembl]. RmlD substrate binding domain [Interproscan].


Gene families : OG_02_0000962 (OrthoFinder) Phylogenetic Tree(s): OG0000962_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CRP49890
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
AAC75101 rfbD, b2040 dTDP-L-rhamnose synthase, NAD(P)-dependent... 0.03 OrthoFinder
AAK99127 spr0323, cpsO dTDP-L-rhamnose synthase [Ensembl]. RmlD substrate... 0.05 OrthoFinder
AKI49032 rfbD, L2625_01115 dTDP-4-dehydrorhamnose reductase [Ensembl]. RmlD-like... 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm IEP Enrichment
MF GO:0008830 dTDP-4-dehydrorhamnose 3,5-epimerase activity IEP Enrichment
BP GO:0009306 protein secretion IEP Enrichment
BP GO:0009405 obsolete pathogenesis IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0016854 racemase and epimerase activity IEP Enrichment
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Enrichment
BP GO:0030254 protein secretion by the type III secretion system IEP Enrichment
CC GO:0030257 type III protein secretion system complex IEP Enrichment
BP GO:0032879 regulation of localization IEP Enrichment
BP GO:0032880 regulation of protein localization IEP Enrichment
BP GO:0032940 secretion by cell IEP Enrichment
BP GO:0035592 establishment of protein localization to extracellular region IEP Enrichment
BP GO:0046903 secretion IEP Enrichment
BP GO:0050708 regulation of protein secretion IEP Enrichment
BP GO:0051046 regulation of secretion IEP Enrichment
BP GO:0051049 regulation of transport IEP Enrichment
BP GO:0051223 regulation of protein transport IEP Enrichment
BP GO:0070201 regulation of establishment of protein localization IEP Enrichment
BP GO:0071692 protein localization to extracellular region IEP Enrichment
BP GO:0071806 protein transmembrane transport IEP Enrichment
BP GO:0140352 export from cell IEP Enrichment
BP GO:1903530 regulation of secretion by cell IEP Enrichment
InterPro domains Description Start Stop
IPR029903 RmlD-like-bd 3 296
Locus_tag PAERUG_E11_London_26_VIM_2_06_13_05597