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  5. CRP51989

CRP51989 (kinB_1)


Aliases : kinB_1

Description : Alginate biosynthesis sensor protein KinB [Ensembl]. PAS fold, CHASE2 domain, Histidine kinase- [Interproscan].


Gene families : OG_02_0000000 (OrthoFinder) Phylogenetic Tree(s): OG0000000_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CRP51989
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
AAC75139 baeS, b2078 sensory histidine kinase in two-component regulatory... 0.03 OrthoFinder
AAC77073 basS, b4112 sensory histidine kinase in two-component regulatory... 0.05 OrthoFinder
AAL20391 STM1471, rstB sensory histidine kinase in two-component regulatory... 0.03 OrthoFinder
AAL21034 STM2130, baeS sensory kinase in two-component regulatoyr system wtih... 0.03 OrthoFinder
AAL21458 STM2564, yfhK putative sensory kinase in regulatory system [Ensembl].... 0.02 OrthoFinder
AAL21669 STM2784, tctE tricarboxylic transport regulatory protein [Ensembl].... 0.04 OrthoFinder
AAL22052 STM3178, ygiY putative sensory histidine kinase in regulatory system... 0.04 OrthoFinder
AAL23115 STM4291, basS sensory kinase in two-component regulatory system with... 0.04 OrthoFinder
AGT22193 N559_0380 osmolarity sensor protein [Ensembl]. HAMP domain, His... 0.03 OrthoFinder
AGT22532 N559_0739, QseC sensor protein QseC [Ensembl]. His Kinase A... 0.05 OrthoFinder
AGT23135 N559_1373 sensor histidine kinase [Ensembl]. His Kinase A... 0.05 OrthoFinder
AGT24180 N559_2494 hypothetical protein [Ensembl]. Histidine kinase-, DNA... 0.03 OrthoFinder
AGT24483 N559_2810 ATPase/histidine kinase/DNA gyrase B/HSP90 domain... 0.05 OrthoFinder
AGT26637 N559_5060 two-component sensor protein [Ensembl]. periplasmic... 0.04 OrthoFinder
AKI49375 lisK, L2625_01475 two-component sensor histidine kinase [Ensembl]. ArlS,... 0.03 OrthoFinder
CCL17519 BN171_1520037 Two-component sensor histidine kinase [Ensembl]. His... 0.03 OrthoFinder
CCL17590 BN171_160006 Sensor protein [Ensembl]. His Kinase A... 0.03 OrthoFinder
CCL18205 BN171_2150019 Two-component sensor histidine kinase [Ensembl]. His... 0.02 OrthoFinder
CCL20250 BN171_390004 Two-component sensor histidine kinase [Ensembl]. His... 0.02 OrthoFinder
CRO24987 envZ_1 Osmolarity sensor protein EnvZ [Ensembl]. HAMP domain,... 0.03 OrthoFinder
KNA52267 VCV51_033432 hsp90-like protein [Ensembl]. HAMP domain, Histidine... 0.04 OrthoFinder
KNA54672 VCV51_030758 hsp90-like protein [Ensembl]. Histidine kinase-, His... 0.03 OrthoFinder
KNA54675 VCV51_030761 hsp90-like protein [Ensembl]. HAMP domain, Histidine... 0.03 OrthoFinder
KNA55648 VCV51_030965 hsp90-like protein [Ensembl]. HAMP domain, Histidine... 0.03 OrthoFinder
KNA60551 VCV51_032222 hsp90-like protein [Ensembl]. Histidine kinase-,... 0.03 OrthoFinder
KNA60767 VCV51_032029 hsp90-like protein [Ensembl]. Histidine kinase-,... 0.04 OrthoFinder
KNA61031 VCV51_032006 hsp90-like protein [Ensembl]. Histidine kinase-, His... 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000030 mannosyltransferase activity IEP Enrichment
MF GO:0000155 phosphorelay sensor kinase activity IEP Enrichment
BP GO:0003333 amino acid transmembrane transport IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0004673 protein histidine kinase activity IEP Enrichment
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005283 amino acid:sodium symporter activity IEP Enrichment
MF GO:0005343 organic acid:sodium symporter activity IEP Enrichment
MF GO:0005416 amino acid:cation symporter activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0006355 regulation of transcription, DNA-templated IEP Enrichment
BP GO:0006486 protein glycosylation IEP Enrichment
BP GO:0006493 protein O-linked glycosylation IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006820 anion transport IEP Enrichment
BP GO:0006835 dicarboxylic acid transport IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008272 sulfate transport IEP Enrichment
MF GO:0008509 anion transmembrane transporter activity IEP Enrichment
BP GO:0009889 regulation of biosynthetic process IEP Enrichment
BP GO:0010468 regulation of gene expression IEP Enrichment
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Enrichment
MF GO:0015081 sodium ion transmembrane transporter activity IEP Enrichment
MF GO:0015116 sulfate transmembrane transporter activity IEP Enrichment
MF GO:0015171 amino acid transmembrane transporter activity IEP Enrichment
MF GO:0015291 secondary active transmembrane transporter activity IEP Enrichment
MF GO:0015294 solute:cation symporter activity IEP Enrichment
MF GO:0015297 antiporter activity IEP Enrichment
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Enrichment
MF GO:0015370 solute:sodium symporter activity IEP Enrichment
MF GO:0015501 glutamate:sodium symporter activity IEP Enrichment
BP GO:0015800 acidic amino acid transport IEP Enrichment
BP GO:0015807 L-amino acid transport IEP Enrichment
BP GO:0015813 L-glutamate transmembrane transport IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
MF GO:0016758 hexosyltransferase activity IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Enrichment
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0019222 regulation of metabolic process IEP Enrichment
MF GO:0022804 active transmembrane transporter activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
BP GO:0031323 regulation of cellular metabolic process IEP Enrichment
BP GO:0031326 regulation of cellular biosynthetic process IEP Enrichment
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Enrichment
BP GO:0043413 macromolecule glycosylation IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0051252 regulation of RNA metabolic process IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
BP GO:0060255 regulation of macromolecule metabolic process IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
BP GO:0070085 glycosylation IEP Enrichment
BP GO:0072348 sulfur compound transport IEP Enrichment
BP GO:0080090 regulation of primary metabolic process IEP Enrichment
BP GO:0098656 anion transmembrane transport IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment
MF GO:0140299 small molecule sensor activity IEP Enrichment
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Enrichment
BP GO:1902475 L-alpha-amino acid transmembrane transport IEP Enrichment
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:1903825 organic acid transmembrane transport IEP Enrichment
BP GO:1905039 carboxylic acid transmembrane transport IEP Enrichment
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Enrichment
BP GO:2001141 regulation of RNA biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR007890 CHASE2 35 323
IPR003594 HATPase_C 654 761
IPR013656 PAS_4 439 540
Locus_tag PAERUG_E11_London_26_VIM_2_06_13_05642