CRP80477 (livF_3)

Aliases : livF_3

Description : LIV-I protein F [Ensembl]. ABC transporter [Interproscan].

Gene families : OG_02_0000009 (OrthoFinder) Phylogenetic Tree(s): OG0000009_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: CRP80477
Cluster	HCCA: Cluster_47

Target	Alias	Description	ECC score	Gene Family Method
AAC76479	livF, b3454	branched-chain amino acid ABC transporter ATPase...	0.07	OrthoFinder
AAK99467	spr0663, livF	ABC transporter ATP-binding protein-branched chain amino...	0.07	OrthoFinder
AAL22420	STM3560, livF	high-affinity branched-chain amino acid transporter...	0.1	OrthoFinder
AGT23714	N559_1987	ATP-binding component of leucine transport [Ensembl].	0.06	OrthoFinder
AGT24375	N559_2699	putative ABC transport ATP-binding subunit [Ensembl].	0.04	OrthoFinder
CCL17875	BN171_1920002	ABC-type transport system, multidrug-family ATP-binding...	0.04	OrthoFinder
CRO51752	livF_1	LIV-I protein F [Ensembl]. ABC transporter [Interproscan].	0.07	OrthoFinder
CRO53242	livF_2	LIV-I protein F [Ensembl]. ABC transporter [Interproscan].	0.12	OrthoFinder
EDJ91952	CGSHi22421_09353	ABC transporter ATP-binding protein [Ensembl]. ABC...	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0016887	ATPase	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0005215	transporter activity	IEP	Enrichment
CC	GO:0005575	cellular_component	IEP	Enrichment
BP	GO:0006810	transport	IEP	Enrichment
MF	GO:0008483	transaminase activity	IEP	Enrichment
CC	GO:0016021	integral component of membrane	IEP	Enrichment
MF	GO:0016769	transferase activity, transferring nitrogenous groups	IEP	Enrichment
MF	GO:0016831	carboxy-lyase activity	IEP	Enrichment
MF	GO:0022857	transmembrane transporter activity	IEP	Enrichment
CC	GO:0031224	intrinsic component of membrane	IEP	Enrichment
BP	GO:0051179	localization	IEP	Enrichment
BP	GO:0051234	establishment of localization	IEP	Enrichment
BP	GO:0055085	transmembrane transport	IEP	Enrichment
CC	GO:0110165	cellular anatomical entity	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	17	161

External Links

Locus_tag	PAERUG_E11_London_26_VIM_2_06_13_06497