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  5. KNA49059

KNA49059 (VCV51_033834)


Aliases : VCV51_033834

Description : ribosomal protein S6 [Ensembl]. Ribosomal protein S6 [Interproscan].


Gene families : OG_02_0000463 (OrthoFinder) Phylogenetic Tree(s): OG0000463_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: KNA49059
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
AAC77157 rpsF, b4200 30S ribosomal subunit protein S6 [Ensembl]. Ribosomal... 0.34 OrthoFinder
AAL00200 spr1396, rpsF 30S Ribosomal protein S6 (S6) [Ensembl]. Ribosomal... 0.11 OrthoFinder
AAL23211 STM4391, rpsF 30S ribosomal subunit protein S6 [Ensembl]. Ribosomal... 0.33 OrthoFinder
ADK86903 rpsF, MPNE_0260 ribosomal protein S6 [Ensembl]. Ribosomal protein S6... 0.14 OrthoFinder
AEA92694 rpsF, OG1RF_10007 30S ribosomal protein S6 [Ensembl]. Ribosomal protein S6... 0.21 OrthoFinder
AGT26292 N559_4700 30S ribosomal protein S6 [Ensembl]. 0.18 OrthoFinder
AHY40276 rpsF, CJ8421_05320 30S ribosomal protein S6 [Ensembl]. Ribosomal protein S6... 0.19 OrthoFinder
AKI48020 rpsF, L2625_00045 ribosomal protein S6 [Ensembl]. Ribosomal protein S6... 0.02 OrthoFinder
AKP14207 rpsF, WX61_00118 30S ribosomal protein S6 [Ensembl]. Ribosomal protein S6... 0.03 OrthoFinder
CBI65791 rpsF, HPB8_234 small subunit ribosomal protein S6 [Ensembl]. Ribosomal... 0.08 OrthoFinder
CCG26824 No alias SSU ribosomal protein S6p [Ensembl]. Ribosomal protein... 0.15 OrthoFinder
CCP42775 rpsF, Rv0053 30S ribosomal protein S6 RpsF [Ensembl]. Ribosomal... 0.02 OrthoFinder
CPC89773 rpsF, ERS093114_01562 30S ribosomalprotein S6p [Ensembl]. Ribosomal protein S6... 0.21 OrthoFinder
CRO54025 rpsF 30S ribosomal protein S6 [Ensembl]. Ribosomal protein S6... 0.28 OrthoFinder
EDJ91444 rpsF, CGSHi22421_06732 30S ribosomal protein S6 [Ensembl]. Ribosomal protein S6... 0.14 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0019843 rRNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Enrichment
MF GO:0004810 tRNA adenylyltransferase activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
MF GO:0008173 RNA methyltransferase activity IEP Enrichment
MF GO:0008176 tRNA (guanine-N7-)-methyltransferase activity IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
MF GO:0009982 pseudouridine synthase activity IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
BP GO:0031554 regulation of DNA-templated transcription, termination IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
BP GO:0032787 monocarboxylic acid metabolic process IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
MF GO:0043138 3'-5' DNA helicase activity IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043244 regulation of protein-containing complex disassembly IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:0046394 carboxylic acid biosynthetic process IEP Enrichment
BP GO:0051128 regulation of cellular component organization IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
MF GO:1990817 RNA adenylyltransferase activity IEP Enrichment
InterPro domains Description Start Stop
IPR000529 Ribosomal_S6 3 91
No external refs found!