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  5. KNA49132

KNA49132 (VCV51_033812)


Aliases : VCV51_033812

Description : ribosomal protein L11 [Ensembl]. Ribosomal protein L11 [Interproscan].


Gene families : OG_02_0000363 (OrthoFinder) Phylogenetic Tree(s): OG0000363_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: KNA49132
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AAC76957 rplK, b3983 50S ribosomal subunit protein L11 [Ensembl]. Ribosomal... 0.28 OrthoFinder
AAK99359 spr0555, rplK 50S Ribosomal protein L11 [Ensembl]. Ribosomal protein... 0.05 OrthoFinder
AAL22977 STM4149, rplK 50 S ribosomal subunit protein L11 [Ensembl]. Ribosomal... 0.34 OrthoFinder
ADK86752 rplK, MPNE_0251 ribosomal protein L11 [Ensembl]. Ribosomal protein L11... 0.12 OrthoFinder
AEA94770 rplK, OG1RF_12083 50S ribosomal protein L11 [Ensembl]. Ribosomal protein... 0.06 OrthoFinder
AGT26521 N559_4937 50S ribosomal protein L11 [Ensembl]. RNA binding domain,... 0.14 OrthoFinder
AHY39727 rplK, CJ8421_02370 50S ribosomal protein L11 [Ensembl]. Ribosomal protein... 0.22 OrthoFinder
AKI48215 rplK, L2625_00265 ribosomal protein L11 [Ensembl]. Ribosomal protein L11... 0.07 OrthoFinder
AKP15107 rplK, WX61_01053 50S ribosomal protein L11 [Ensembl]. Ribosomal protein... 0.1 OrthoFinder
CBI65846 rplK, HPB8_289 large subunit ribosomal protein L11 [Ensembl]. Ribosomal... 0.06 OrthoFinder
CCG26741 No alias LSU ribosomal protein L11p (L12e) [Ensembl]. Ribosomal... 0.04 OrthoFinder
CCL20639 rplK, BN171_80004 50S ribosomal protein L11 [Ensembl]. Ribosomal protein... 0.18 OrthoFinder
CCP43383 rplK, Rv0640 50S ribosomal protein L11 RplK [Ensembl]. Ribosomal... 0.14 OrthoFinder
CPC57428 rplK, ERS093114_00842 50S ribosomal protein L11 [Ensembl]. Ribosomal protein... 0.26 OrthoFinder
CRO73449 rplK 50S ribosomal protein L11 [Ensembl]. Ribosomal protein... 0.26 OrthoFinder
EDJ91477 CGSHi22421_06897 50S ribosomal protein L11 [Ensembl]. Ribosomal protein... 0.11 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0002161 aminoacyl-tRNA editing activity IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003697 single-stranded DNA binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006323 DNA packaging IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006575 cellular modified amino acid metabolic process IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0009396 folic acid-containing compound biosynthetic process IEP Enrichment
BP GO:0015939 pantothenate metabolic process IEP Enrichment
BP GO:0015940 pantothenate biosynthetic process IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
BP GO:0030261 chromosome condensation IEP Enrichment
BP GO:0031554 regulation of DNA-templated transcription, termination IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Enrichment
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Enrichment
BP GO:0043244 regulation of protein-containing complex disassembly IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0051128 regulation of cellular component organization IEP Enrichment
MF GO:0052689 carboxylic ester hydrolase activity IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR020784 Ribosomal_L11_N 2 67
IPR020783 Ribosomal_L11_C 72 140
No external refs found!