KNA50301 (VCV51_031453)

Aliases : VCV51_031453

Description : glutamyl-tRNA reductase [Ensembl]. Glutamyl-tRNAGlu reductase, Shikimate / quinate 5-dehydrogenase [Interproscan].

Gene families : OG_02_0000915 (OrthoFinder) Phylogenetic Tree(s): OG0000915_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: KNA50301
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
AAC74294 hemA, b1210 glutamyl tRNA reductase [Ensembl]. Glutamyl-tRNAGlu... 0.06 OrthoFinder
AAL20692 STM1777, hemA glutamyl tRNA reductase [Ensembl]. Glutamyl-tRNAGlu... 0.05 OrthoFinder
AKP14478 hemA, WX61_00396 Glutamyl-tRNA reductase [Ensembl]. Glutamyl-tRNAGlu... 0.03 OrthoFinder
CCP43246 hemA, Rv0509 Probable glutamyl-tRNA reductase HemA (GLUTR) [Ensembl].... 0.03 OrthoFinder
CRO62373 hemA Glutamyl-tRNA reductase [Ensembl]. Glutamyl-tRNAGlu... 0.06 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0002161 aminoacyl-tRNA editing activity IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003678 DNA helicase activity IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003725 double-stranded RNA binding IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
BP GO:0006415 translational termination IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
MF GO:0008173 RNA methyltransferase activity IEP Enrichment
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP Enrichment
CC GO:0009317 acetyl-CoA carboxylase complex IEP Enrichment
CC GO:0009898 cytoplasmic side of plasma membrane IEP Enrichment
MF GO:0009982 pseudouridine synthase activity IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
BP GO:0022411 cellular component disassembly IEP Enrichment
BP GO:0032984 protein-containing complex disassembly IEP Enrichment
MF GO:0043138 3'-5' DNA helicase activity IEP Enrichment
BP GO:0043624 cellular protein complex disassembly IEP Enrichment
MF GO:0070402 NADPH binding IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
CC GO:0098552 side of membrane IEP Enrichment
CC GO:0098562 cytoplasmic side of membrane IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR015895 4pyrrol_synth_GluRdtase_N 6 154
IPR006151 Shikm_DH/Glu-tRNA_Rdtase 170 304
IPR015896 4pyrrol_synth_GluRdtase_dimer 318 413
No external refs found!