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  5. KNA50940

KNA50940 (VCV51_033648)


Aliases : VCV51_033648

Description : DNA topoisomerase IV [Ensembl]. Toprim domain, Histidine kinase-, DNA gyrase B subunit [Interproscan].


Gene families : OG_02_0000123 (OrthoFinder) Phylogenetic Tree(s): OG0000123_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: KNA50940
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
AAC76066 parE, b3030 DNA topoisomerase IV, subunit B [Ensembl]. Toprim... 0.04 OrthoFinder
AAK99519 spr0715, gyrB DNA gyrase [Ensembl]. Toprim domain, Histidine kinase-,... 0.03 OrthoFinder
AAL22694 STM3835, gyrB DNA gyrase, subunit B [Ensembl]. Toprim domain,... 0.05 OrthoFinder
AAT48201 gyrB, b3699 DNA gyrase, subunit B [Ensembl]. Toprim domain,... 0.04 OrthoFinder
ADK86799 parE, MPNE_0140 DNA topoisomerase IV, B subunit [Ensembl]. DNA gyrase B,... 0.02 OrthoFinder
AGT21871 N559_0038 DNA gyrase subunit B [Ensembl]. DNA gyrase B subunit... 0.04 OrthoFinder
AHY39280 gyrB, CJ8421_00015 DNA gyrase subunit B [Ensembl]. Toprim domain, Histidine... 0.03 OrthoFinder
AKP14396 parE, WX61_00313 DNA topoisomerase 4 subunit B [Ensembl]. Toprim domain,... 0.04 OrthoFinder
AKP15193 gyrB, WX61_01144 DNA gyrase subunit B [Ensembl]. Toprim domain, Histidine... 0.04 OrthoFinder
CBI66243 gyrB, HPB8_686 DNA gyrase, B subunit [Ensembl]. Toprim domain,... 0.02 OrthoFinder
CCG27125 No alias DNA gyrase subunit B [Ensembl]. Toprim domain, Histidine... 0.04 OrthoFinder
CCL16917 gyrB, BN171_10005 DNA gyrase subunit B [Ensembl]. DNA gyrase B, Toprim... 0.03 OrthoFinder
CCP42727 gyrB, Rv0005 DNA gyrase (subunit B) GyrB (DNA topoisomerase... 0.03 OrthoFinder
CPC69731 gyrB, ERS093114_01087 DNA gyrase subunit B [Ensembl]. Toprim domain, Histidine... 0.06 OrthoFinder
CRO55054 parE DNA topoisomerase 4 subunit B [Ensembl]. Toprim domain,... 0.06 OrthoFinder
CRP69988 gyrB DNA gyrase subunit B [Ensembl]. Toprim domain, Histidine... 0.06 OrthoFinder
EDJ89973 CGSHi22421_07703 DNA topoisomerase IV subunit B [Ensembl]. Toprim domain,... 0.06 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0006265 DNA topological change IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000902 cell morphogenesis IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0005216 ion channel activity IEP Enrichment
MF GO:0005261 cation channel activity IEP Enrichment
BP GO:0006323 DNA packaging IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006415 translational termination IEP Enrichment
BP GO:0006426 glycyl-tRNA aminoacylation IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006629 lipid metabolic process IEP Enrichment
BP GO:0006721 terpenoid metabolic process IEP Enrichment
BP GO:0006754 ATP biosynthetic process IEP Enrichment
BP GO:0006812 cation transport IEP Enrichment
MF GO:0008324 cation transmembrane transporter activity IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009141 nucleoside triphosphate metabolic process IEP Enrichment
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP Enrichment
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP Enrichment
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP Enrichment
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP Enrichment
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP Enrichment
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP Enrichment
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP Enrichment
BP GO:0009653 anatomical structure morphogenesis IEP Enrichment
MF GO:0015075 ion transmembrane transporter activity IEP Enrichment
MF GO:0015078 proton transmembrane transporter activity IEP Enrichment
MF GO:0015252 proton channel activity IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Enrichment
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Enrichment
BP GO:0015986 ATP synthesis coupled proton transport IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016114 terpenoid biosynthetic process IEP Enrichment
MF GO:0016758 hexosyltransferase activity IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
BP GO:0022411 cellular component disassembly IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Enrichment
MF GO:0030145 manganese ion binding IEP Enrichment
BP GO:0030258 lipid modification IEP Enrichment
BP GO:0030259 lipid glycosylation IEP Enrichment
BP GO:0030261 chromosome condensation IEP Enrichment
BP GO:0032502 developmental process IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
BP GO:0032984 protein-containing complex disassembly IEP Enrichment
BP GO:0034220 ion transmembrane transport IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043624 cellular protein complex disassembly IEP Enrichment
BP GO:0044255 cellular lipid metabolic process IEP Enrichment
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Enrichment
BP GO:0051302 regulation of cell division IEP Enrichment
BP GO:0070085 glycosylation IEP Enrichment
MF GO:0070567 cytidylyltransferase activity IEP Enrichment
BP GO:0098655 cation transmembrane transport IEP Enrichment
BP GO:0098660 inorganic ion transmembrane transport IEP Enrichment
BP GO:0098662 inorganic cation transmembrane transport IEP Enrichment
BP GO:1902600 proton transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR002288 DNA_gyrase_B_C 556 618
IPR003594 HATPase_C 28 170
IPR006171 TOPRIM_domain 413 522
IPR013506 Topo_IIA_bsu_dom2 218 384
No external refs found!