KNA51821 (VCV51_030372)

Aliases : VCV51_030372

Description : signal recognition particle protein [Ensembl]. SRP54-type protein, Signal peptide binding domain [Interproscan].

Gene families : OG_02_0000064 (OrthoFinder) Phylogenetic Tree(s): OG0000064_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: KNA51821
Cluster	HCCA: Cluster_1

Target	Alias	Description	ECC score	Gene Family Method
AAC75659	ffh, b2610	Signal Recognition Particle (SRP) component with 4.5S...	0.06	OrthoFinder
AAC76489	ftsY, b3464	Signal Recognition Particle (SRP) receptor [Ensembl]....	0.04	OrthoFinder
AAK99926	spr1123, ftsY	Cell division protein FtsY [Ensembl]. SRP54-type protein...	0.03	OrthoFinder
AAL21566	STM2677, ffh	4.5S-RNP protein [Ensembl]. SRP54-type protein, Signal...	0.07	OrthoFinder
AAL22431	STM3571, ftsY	GTPase domain of cell division membrane protein...	0.05	OrthoFinder
ADK87074	ffh, MPNE_0071	signal recognition particle protein [Ensembl]....	0.02	OrthoFinder
AGT22143	N559_0324, FtsY	signal recognition particle-docking protein FtsY...	0.05	OrthoFinder
AGT23083	N559_1321	fifty-four-like protein [Ensembl]. Signal peptide...	0.06	OrthoFinder
AKI49796	ffh, L2625_01943	signal recognition particle protein [Ensembl]. Signal...	0.04	OrthoFinder
AKI49798	ftsY, L2625_01945	cell division ABC transporter, substrate-binding protein...	0.04	OrthoFinder
AKP14839	ffh, WX61_00772	Signal recognition particle protein [Ensembl]....	0.05	OrthoFinder
AKP14903	ftsY, WX61_00836	Signal recognition particle receptor FtsY [Ensembl]....	0.03	OrthoFinder
CCG26224	FtsY	Signal recognition particle receptor protein FtsY...	0.02	OrthoFinder
CCG26852	No alias	Signal recognition particle, subunit Ffh SRP54 (TC...	0.04	OrthoFinder
CPC35989	ftsY, ERS093114_00189	Signal recognition particle receptor protein FtsY...	0.03	OrthoFinder
CRP24369	ftsY	Signal recognition particle receptor FtsY [Ensembl]....	0.04	OrthoFinder
EDJ90378	CGSHi22421_01512	Signal recognition particle protein [Ensembl]....	0.03	OrthoFinder
EDJ91345	CGSHi22421_04558	cell division protein FtsY [Ensembl]. SRP54-type protein...	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006605	protein targeting	None	Extended
BP	GO:0006612	protein targeting to membrane	None	Extended
BP	GO:0006613	cotranslational protein targeting to membrane	None	Extended
BP	GO:0006614	SRP-dependent cotranslational protein targeting to membrane	IEA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	None	Extended
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0033365	protein localization to organelle	None	Extended
BP	GO:0034613	cellular protein localization	None	Extended
BP	GO:0045047	protein targeting to ER	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
CC	GO:0048500	signal recognition particle	IEA	Interproscan
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0051668	localization within membrane	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0070972	protein localization to endoplasmic reticulum	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0072594	establishment of protein localization to organelle	None	Extended
BP	GO:0072599	establishment of protein localization to endoplasmic reticulum	None	Extended
BP	GO:0072657	protein localization to membrane	None	Extended
BP	GO:0090150	establishment of protein localization to membrane	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	IEP	Enrichment
MF	GO:0003824	catalytic activity	IEP	Enrichment
MF	GO:0004529	exodeoxyribonuclease activity	IEP	Enrichment
MF	GO:0004536	deoxyribonuclease activity	IEP	Enrichment
MF	GO:0004721	phosphoprotein phosphatase activity	IEP	Enrichment
BP	GO:0006298	mismatch repair	IEP	Enrichment
BP	GO:0006419	alanyl-tRNA aminoacylation	IEP	Enrichment
BP	GO:0006553	lysine metabolic process	IEP	Enrichment
BP	GO:0006575	cellular modified amino acid metabolic process	IEP	Enrichment
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	Enrichment
BP	GO:0006760	folic acid-containing compound metabolic process	IEP	Enrichment
MF	GO:0008813	chorismate lyase activity	IEP	Enrichment
MF	GO:0008852	exodeoxyribonuclease I activity	IEP	Enrichment
MF	GO:0008990	rRNA (guanine-N2-)-methyltransferase activity	IEP	Enrichment
BP	GO:0009085	lysine biosynthetic process	IEP	Enrichment
BP	GO:0009089	lysine biosynthetic process via diaminopimelate	IEP	Enrichment
MF	GO:0009378	four-way junction helicase activity	IEP	Enrichment
MF	GO:0016435	rRNA (guanine) methyltransferase activity	IEP	Enrichment
MF	GO:0016725	oxidoreductase activity, acting on CH or CH2 groups	IEP	Enrichment
MF	GO:0016726	oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor	IEP	Enrichment
MF	GO:0016740	transferase activity	IEP	Enrichment
MF	GO:0016757	glycosyltransferase activity	IEP	Enrichment
MF	GO:0016787	hydrolase activity	IEP	Enrichment
MF	GO:0016796	exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters	IEP	Enrichment
MF	GO:0016833	oxo-acid-lyase activity	IEP	Enrichment
MF	GO:0016887	ATPase	IEP	Enrichment
MF	GO:0016895	exodeoxyribonuclease activity, producing 5'-phosphomonoesters	IEP	Enrichment
BP	GO:0042558	pteridine-containing compound metabolic process	IEP	Enrichment
BP	GO:0042592	homeostatic process	IEP	Enrichment
MF	GO:0043772	acyl-phosphate glycerol-3-phosphate acyltransferase activity	IEP	Enrichment
BP	GO:0044237	cellular metabolic process	IEP	Enrichment
BP	GO:0046451	diaminopimelate metabolic process	IEP	Enrichment
BP	GO:0046483	heterocycle metabolic process	IEP	Enrichment
BP	GO:0048878	chemical homeostasis	IEP	Enrichment
MF	GO:0050380	undecaprenyl-diphosphatase activity	IEP	Enrichment
BP	GO:0050801	ion homeostasis	IEP	Enrichment
MF	GO:0051745	4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity	IEP	Enrichment
BP	GO:0055065	metal ion homeostasis	IEP	Enrichment
BP	GO:0055070	copper ion homeostasis	IEP	Enrichment
BP	GO:0055076	transition metal ion homeostasis	IEP	Enrichment
BP	GO:0055080	cation homeostasis	IEP	Enrichment
BP	GO:0098771	inorganic ion homeostasis	IEP	Enrichment
MF	GO:0140097	catalytic activity, acting on DNA	IEP	Enrichment
BP	GO:1901360	organic cyclic compound metabolic process	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR000897	SRP54_GTPase_dom	100	296
IPR013822	Signal_recog_particl_SRP54_hlx	5	82
IPR004125	Signal_recog_particle_SRP54_M	329	427

External Links

No external refs found!

KNA51821 (VCV51_030372)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation