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KNA52494 (VCV51_030151)


Aliases : VCV51_030151

Description : formamidopyrimidine-DNA glycosylase [Ensembl]. Zinc finger found in FPG and IleRS, Formamidopyrimidine-DNA glycosylase H2TH domain, Formamidopyrimidine-DNA glycosylase N-terminal domain [Interproscan].


Gene families : OG_02_0000689 (OrthoFinder) Phylogenetic Tree(s): OG0000689_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: KNA52494
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
AAC76659 mutM, b3635 formamidopyrimidine/5-formyluracil/... 0.01 OrthoFinder
AGT21995 N559_0172 formamidopyrimidine-DNA glycosylase [Ensembl].... 0.03 OrthoFinder
AKP14179 mutM, WX61_00090 Formamidopyrimidine-DNA glycosylase [Ensembl]. Zinc... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEP Enrichment
MF GO:0004518 nuclease activity IEP Enrichment
MF GO:0004527 exonuclease activity IEP Enrichment
BP GO:0006553 lysine metabolic process IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
MF GO:0008408 3'-5' exonuclease activity IEP Enrichment
MF GO:0008813 chorismate lyase activity IEP Enrichment
BP GO:0009085 lysine biosynthetic process IEP Enrichment
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP Enrichment
MF GO:0009378 four-way junction helicase activity IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016833 oxo-acid-lyase activity IEP Enrichment
MF GO:0016846 carbon-sulfur lyase activity IEP Enrichment
BP GO:0042592 homeostatic process IEP Enrichment
MF GO:0043768 S-ribosylhomocysteine lyase activity IEP Enrichment
BP GO:0046451 diaminopimelate metabolic process IEP Enrichment
CC GO:0048500 signal recognition particle IEP Enrichment
BP GO:0048878 chemical homeostasis IEP Enrichment
BP GO:0050801 ion homeostasis IEP Enrichment
BP GO:0055065 metal ion homeostasis IEP Enrichment
BP GO:0055070 copper ion homeostasis IEP Enrichment
BP GO:0055076 transition metal ion homeostasis IEP Enrichment
BP GO:0055080 cation homeostasis IEP Enrichment
BP GO:0098771 inorganic ion homeostasis IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
InterPro domains Description Start Stop
IPR010663 Znf_FPG/IleRS 242 269
IPR015886 DNA_glyclase/AP_lyase_DNA-bd 129 219
IPR012319 FPG_cat 1 114
No external refs found!