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  5. KNA54989

KNA54989 (VCV51_033172)


Aliases : VCV51_033172

Description : ribosomal protein S5 [Ensembl]. Ribosomal protein S5 [Interproscan].


Gene families : OG_02_0000394 (OrthoFinder) Phylogenetic Tree(s): OG0000394_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: KNA54989
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AAC76328 rpsE, b3303 30S ribosomal subunit protein S5 [Ensembl]. Ribosomal... 0.31 OrthoFinder
AAK99010 spr0206, rpsE 30S Ribosomal protein S5 [Ensembl]. Ribosomal protein S5... 0.18 OrthoFinder
AAL22286 STM3423, rpsE 30S ribosomal subunit protein S5 [Ensembl]. Ribosomal... 0.35 OrthoFinder
ADK86962 rpsE, MPNE_0211 ribosomal protein S5 [Ensembl]. Ribosomal protein S5... 0.16 OrthoFinder
AEA92855 rpsE, OG1RF_10168 30S ribosomal protein S5 [Ensembl]. Ribosomal protein S5... 0.18 OrthoFinder
AGT22259 N559_0451 30S ribosomal protein S5 [Ensembl]. C-terminal domain,... 0.23 OrthoFinder
AHY40875 rpsE, CJ8421_08515 30S ribosomal protein S5 [Ensembl]. Ribosomal protein S5... 0.24 OrthoFinder
AKI50550 rpsE, L2625_02760 ribosomal protein S5 [Ensembl]. Ribosomal protein S5... 0.15 OrthoFinder
AKP15139 rpsE, WX61_01085 30S ribosomal protein S5 [Ensembl]. Ribosomal protein S5... 0.08 OrthoFinder
CBI65734 rpsE, HPB8_177 small subunit ribosomal protein S5 [Ensembl]. Ribosomal... 0.16 OrthoFinder
CCG27396 No alias SSU ribosomal protein S5p (S2e) [Ensembl]. Ribosomal... 0.14 OrthoFinder
CCL20580 rpsE, BN171_70020 30S ribosomal protein S5 [Ensembl]. Ribosomal protein S5... 0.21 OrthoFinder
CCP43465 rpsE, Rv0721 30S ribosomal protein S5 RpsE [Ensembl]. Ribosomal... 0.1 OrthoFinder
CPD14101 rpsE, ERS093114_02139 30S ribosomal protein S5 [Ensembl]. Ribosomal protein S5... 0.22 OrthoFinder
CRO74251 rpsE 30S ribosomal protein S5 [Ensembl]. Ribosomal protein S5... 0.25 OrthoFinder
EDJ91373 rpsE, CGSHi22421_04698 30S ribosomal protein S5 [Ensembl]. Ribosomal protein S5... 0.26 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Enrichment
MF GO:0004810 tRNA adenylyltransferase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006438 valyl-tRNA aminoacylation IEP Enrichment
MF GO:0008097 5S rRNA binding IEP Enrichment
MF GO:0008173 RNA methyltransferase activity IEP Enrichment
MF GO:0008176 tRNA (guanine-N7-)-methyltransferase activity IEP Enrichment
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Enrichment
MF GO:0009982 pseudouridine synthase activity IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
BP GO:0031554 regulation of DNA-templated transcription, termination IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
BP GO:0032787 monocarboxylic acid metabolic process IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
MF GO:0043138 3'-5' DNA helicase activity IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043244 regulation of protein-containing complex disassembly IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
MF GO:0046983 protein dimerization activity IEP Enrichment
BP GO:0051128 regulation of cellular component organization IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
MF GO:1990817 RNA adenylyltransferase activity IEP Enrichment
InterPro domains Description Start Stop
IPR005324 Ribosomal_S5_C 88 158
IPR013810 Ribosomal_S5_N 12 75
No external refs found!