KNA54995 (VCV51_033178)

Aliases : VCV51_033178

Description : 30S ribosomal protein S11 [Ensembl]. Ribosomal protein S11 [Interproscan].

Gene families : OG_02_0000561 (OrthoFinder) Phylogenetic Tree(s): OG0000561_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: KNA54995
Cluster	HCCA: Cluster_8

Target	Alias	Description	ECC score	Gene Family Method
AAC76322	rpsK, b3297	30S ribosomal subunit protein S11 [Ensembl]. Ribosomal...	0.38	OrthoFinder
AAK99018	spr0214, rpsK	30S Ribosomal protein S11 [Ensembl]. Ribosomal protein...	0.18	OrthoFinder
AAL22280	STM3417, rpsK	30S ribosomal subunit protein S11 [Ensembl]. Ribosomal...	0.28	OrthoFinder
ADK86660	rpsK, MPNE_0219	30S ribosomal protein S11 [Ensembl].	0.19	OrthoFinder
AEA92863	rpsK, OG1RF_10176	30S ribosomal protein S11 [Ensembl]. Ribosomal protein...	0.22	OrthoFinder
AHY40766	CJ8421_07970	30S ribosomal protein S11 [Ensembl]. Ribosomal protein...	0.12	OrthoFinder
AKI50542	rpsK, L2625_02752	ribosomal protein S11 [Ensembl]. Ribosomal protein S11...	0.18	OrthoFinder
CBI65741	rpsK, HPB8_184	small subunit ribosomal protein S11 [Ensembl]. Ribosomal...	0.14	OrthoFinder
CCG27404	No alias	SSU ribosomal protein S11p (S14e) [Ensembl]. Ribosomal...	0.15	OrthoFinder
CCL20589	rpsK, BN171_70029	30S ribosomal protein S11 [Ensembl]. Ribosomal protein...	0.17	OrthoFinder
CCP46281	rpsK, Rv3459c	30S ribosomal protein S11 RpsK [Ensembl]. Ribosomal...	0.12	OrthoFinder
CPD14353	rpsK, ERS093114_02147	30S ribosomal protein S11 [Ensembl]. Ribosomal protein...	0.25	OrthoFinder
CRO74429	rpsK	30S ribosomal protein S11 [Ensembl]. Ribosomal protein...	0.22	OrthoFinder
EDJ91379	CGSHi22421_04728	30S ribosomal protein S11 [Ensembl]. Ribosomal protein...	0.24	OrthoFinder

Type	GO Term	Name	Evidence	Source
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	Enrichment
MF	GO:0003674	molecular_function	IEP	Enrichment
MF	GO:0003676	nucleic acid binding	IEP	Enrichment
MF	GO:0003723	RNA binding	IEP	Enrichment
MF	GO:0004652	polynucleotide adenylyltransferase activity	IEP	Enrichment
MF	GO:0004810	tRNA adenylyltransferase activity	IEP	Enrichment
MF	GO:0005488	binding	IEP	Enrichment
MF	GO:0005525	GTP binding	IEP	Enrichment
BP	GO:0006396	RNA processing	IEP	Enrichment
BP	GO:0006438	valyl-tRNA aminoacylation	IEP	Enrichment
BP	GO:0016070	RNA metabolic process	IEP	Enrichment
MF	GO:0016853	isomerase activity	IEP	Enrichment
MF	GO:0017076	purine nucleotide binding	IEP	Enrichment
MF	GO:0019001	guanyl nucleotide binding	IEP	Enrichment
MF	GO:0019843	rRNA binding	IEP	Enrichment
BP	GO:0022613	ribonucleoprotein complex biogenesis	IEP	Enrichment
BP	GO:0031554	regulation of DNA-templated transcription, termination	IEP	Enrichment
MF	GO:0032553	ribonucleotide binding	IEP	Enrichment
MF	GO:0032555	purine ribonucleotide binding	IEP	Enrichment
MF	GO:0032561	guanyl ribonucleotide binding	IEP	Enrichment
BP	GO:0034660	ncRNA metabolic process	IEP	Enrichment
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Enrichment
MF	GO:0036094	small molecule binding	IEP	Enrichment
BP	GO:0042254	ribosome biogenesis	IEP	Enrichment
MF	GO:0043167	ion binding	IEP	Enrichment
MF	GO:0043168	anion binding	IEP	Enrichment
BP	GO:0043244	regulation of protein-containing complex disassembly	IEP	Enrichment
BP	GO:0044085	cellular component biogenesis	IEP	Enrichment
MF	GO:0046983	protein dimerization activity	IEP	Enrichment
BP	GO:0051128	regulation of cellular component organization	IEP	Enrichment
MF	GO:0051536	iron-sulfur cluster binding	IEP	Enrichment
MF	GO:0051539	4 iron, 4 sulfur cluster binding	IEP	Enrichment
MF	GO:0051540	metal cluster binding	IEP	Enrichment
MF	GO:0097159	organic cyclic compound binding	IEP	Enrichment
MF	GO:0097367	carbohydrate derivative binding	IEP	Enrichment
MF	GO:1901265	nucleoside phosphate binding	IEP	Enrichment
MF	GO:1901363	heterocyclic compound binding	IEP	Enrichment
MF	GO:1990817	RNA adenylyltransferase activity	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR001971	Ribosomal_S11	19	128

External Links

No external refs found!

KNA54995 (VCV51_033178)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation