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  5. AEA93356

AEA93356 (OG1RF_10669)


Aliases : OG1RF_10669

Description : ABC superfamily ATP binding cassette transporter, membrane protein [Ensembl]. ABC transporter transmembrane region [Interproscan].


Gene families : OG_02_0000006 (OrthoFinder) Phylogenetic Tree(s): OG0000006_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AEA93356
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
AAL00020 spr1216, ABC-N/P ABC transporter ATP-binding/membrane-spanning... 0.03 OrthoFinder
AAL00687 spr1885, ABC-NP ABC transporter ATP-binding/membrane spanning... 0.05 OrthoFinder
AAL00689 spr1887, ABC-NP ABC transporter ATP-binding/membrane spanning... 0.05 OrthoFinder
AAL19918 STM0984, msbA multicopy repressor of htrB transport protein; ABC... 0.03 OrthoFinder
AGT24993 N559_3337 lipid transporter ATP-binding/permease protein... 0.03 OrthoFinder
AKI48785 L2625_00857 ABC transporter, ATP-binding/permease protein [Ensembl].... 0.07 OrthoFinder
AKP15308 msbA, WX61_01259 Lipid A export ATP-binding/permease protein MsbA... 0.04 OrthoFinder
CCL18601 BN171_2440042 ABC-type transport system, multidrug-family... 0.04 OrthoFinder
CCL19310 BN171_3020022 ABC-type transport system, multidrug-family... 0.04 OrthoFinder
CPD01712 ERS093114_01834 Lipid A export ATP-binding/permease protein MsbA... 0.04 OrthoFinder
CRO55966 msbA Lipid A export ATP-binding/permease protein MsbA... 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003690 double-stranded DNA binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0004146 dihydrofolate reductase activity IEP Enrichment
MF GO:0004185 serine-type carboxypeptidase activity IEP Enrichment
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Enrichment
MF GO:0004788 thiamine diphosphokinase activity IEP Enrichment
MF GO:0004810 tRNA adenylyltransferase activity IEP Enrichment
BP GO:0006275 regulation of DNA replication IEP Enrichment
BP GO:0006298 mismatch repair IEP Enrichment
BP GO:0006353 DNA-templated transcription, termination IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
BP GO:0008610 lipid biosynthetic process IEP Enrichment
MF GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase IEP Enrichment
MF GO:0009002 serine-type D-Ala-D-Ala carboxypeptidase activity IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009229 thiamine diphosphate biosynthetic process IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
MF GO:0009982 pseudouridine synthase activity IEP Enrichment
BP GO:0016053 organic acid biosynthetic process IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
MF GO:0030975 thiamine binding IEP Enrichment
MF GO:0030983 mismatched DNA binding IEP Enrichment
BP GO:0042357 thiamine diphosphate metabolic process IEP Enrichment
BP GO:0042558 pteridine-containing compound metabolic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
MF GO:0043772 acyl-phosphate glycerol-3-phosphate acyltransferase activity IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044255 cellular lipid metabolic process IEP Enrichment
BP GO:0044283 small molecule biosynthetic process IEP Enrichment
BP GO:0046394 carboxylic acid biosynthetic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0046653 tetrahydrofolate metabolic process IEP Enrichment
BP GO:0046654 tetrahydrofolate biosynthetic process IEP Enrichment
MF GO:0047429 nucleoside-triphosphate diphosphatase activity IEP Enrichment
MF GO:0070008 serine-type exopeptidase activity IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
MF GO:1901681 sulfur compound binding IEP Enrichment
MF GO:1990817 RNA adenylyltransferase activity IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 349 496
IPR011527 ABC1_TM_dom 15 285
No external refs found!