1. Home
  2. Species
  3. Vibrio cholerae
  4. Sequence
  5. KNA56919

KNA56919 (VCV51_030548)


Aliases : VCV51_030548

Description : type III restriction enzyme [Ensembl]. PLD-like domain, Type III restriction enzyme, Helicase conserved C-terminal domain [Interproscan].


Gene families : OG_02_0001013 (OrthoFinder) Phylogenetic Tree(s): OG0001013_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: KNA56919
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
AGT23382 N559_1636 putative ATP-dependent helicase [Ensembl]. Helicase... 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0016787 hydrolase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003690 double-stranded DNA binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
BP GO:0006298 mismatch repair IEP Enrichment
BP GO:0008643 carbohydrate transport IEP Enrichment
MF GO:0008813 chorismate lyase activity IEP Enrichment
BP GO:0009396 folic acid-containing compound biosynthetic process IEP Enrichment
BP GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system IEP Enrichment
MF GO:0016833 oxo-acid-lyase activity IEP Enrichment
BP GO:0017013 protein flavinylation IEP Enrichment
MF GO:0030983 mismatched DNA binding IEP Enrichment
BP GO:0042558 pteridine-containing compound metabolic process IEP Enrichment
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Enrichment
BP GO:0042592 homeostatic process IEP Enrichment
BP GO:0045229 external encapsulating structure organization IEP Enrichment
BP GO:0048878 chemical homeostasis IEP Enrichment
BP GO:0050801 ion homeostasis IEP Enrichment
BP GO:0055065 metal ion homeostasis IEP Enrichment
BP GO:0055070 copper ion homeostasis IEP Enrichment
BP GO:0055076 transition metal ion homeostasis IEP Enrichment
BP GO:0055080 cation homeostasis IEP Enrichment
BP GO:0065008 regulation of biological quality IEP Enrichment
BP GO:0071554 cell wall organization or biogenesis IEP Enrichment
BP GO:0071555 cell wall organization IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0098771 inorganic ion homeostasis IEP Enrichment
InterPro domains Description Start Stop
IPR001650 Helicase_C 433 537
IPR025202 PLD-like_dom 27 150
IPR006935 Helicase/UvrB_N 218 364
No external refs found!