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  5. KNA57458

KNA57458 (VCV51_030448)


Aliases : VCV51_030448

Description : hydroxymethylbutenyl pyrophosphate reductase [Ensembl]. LytB protein [Interproscan].


Gene families : OG_02_0000852 (OrthoFinder) Phylogenetic Tree(s): OG0000852_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: KNA57458
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
AAC73140 ispH, b0029 4-hydroxy-3-methylbut-2-enyl diphosphate reductase,... 0.05 OrthoFinder
AAL19013 STM0049, lytB regulates the activity of guanosine... 0.04 OrthoFinder
CCP46203 lytB1, Rv3382c Probable LYTB-related protein LytB1 [Ensembl]. LytB... 0.02 OrthoFinder
CRN66060 ispH 4-hydroxy-3-methylbut-2-enyl diphosphate reductase... 0.06 OrthoFinder
EDJ91807 CGSHi22421_08628 4-hydroxy-3-methylbut-2-enyl diphosphate reductase... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0051745 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003690 double-stranded DNA binding IEP Enrichment
MF GO:0003855 3-dehydroquinate dehydratase activity IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006298 mismatch repair IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006419 alanyl-tRNA aminoacylation IEP Enrichment
BP GO:0006420 arginyl-tRNA aminoacylation IEP Enrichment
BP GO:0006426 glycyl-tRNA aminoacylation IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006575 cellular modified amino acid metabolic process IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
CC GO:0009317 acetyl-CoA carboxylase complex IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016757 glycosyltransferase activity IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
MF GO:0030983 mismatched DNA binding IEP Enrichment
MF GO:0032977 membrane insertase activity IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Enrichment
BP GO:0042558 pteridine-containing compound metabolic process IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
MF GO:0043138 3'-5' DNA helicase activity IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
CC GO:0048500 signal recognition particle IEP Enrichment
MF GO:0050380 undecaprenyl-diphosphatase activity IEP Enrichment
MF GO:0070567 cytidylyltransferase activity IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0140104 molecular carrier activity IEP Enrichment
MF GO:0140597 protein carrier activity IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
InterPro domains Description Start Stop
IPR003451 LytB/IspH 7 288
No external refs found!