KNA58246 (VCV51_032754)

Aliases : VCV51_032754

Description : RNA pseudouridylate synthase [Ensembl]. S4 domain, RNA pseudouridylate synthase [Interproscan].

Gene families : OG_02_0000058 (OrthoFinder) Phylogenetic Tree(s): OG0000058_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: KNA58246
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
AAC74351 rluB, b1269 23S rRNA pseudouridine(2605) synthase [Ensembl]. S4... 0.05 OrthoFinder
AAC75244 rsuA, b2183 16S rRNA pseudouridine(516) synthase [Ensembl]. S4... 0.03 OrthoFinder
AAL20637 STM1719, yciL putative ribosomal large subunit pseudouridine synthase... 0.04 OrthoFinder
AEA93088 rsuA, OG1RF_10401 ribosomal small subunit pseudouridine synthase A... 0.02 OrthoFinder
AGT23383 N559_1637 16S rRNA pseudouridylate synthase A [Ensembl]. S4 domain... 0.04 OrthoFinder
AGT24675 N559_3012 23S rRNA pseudouridylate synthase B [Ensembl]. S4 domain... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0009982 pseudouridine synthase activity IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000902 cell morphogenesis IEP Enrichment
MF GO:0008081 phosphoric diester hydrolase activity IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
BP GO:0009653 anatomical structure morphogenesis IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
BP GO:0032502 developmental process IEP Enrichment
BP GO:0051302 regulation of cell division IEP Enrichment
InterPro domains Description Start Stop
IPR006145 PsdUridine_synth_RsuA/RluA 61 191
IPR002942 S4_RNA-bd 1 43
No external refs found!