AEA93634 (rho, OG1RF_10947)

Aliases : rho, OG1RF_10947

Description : transcription termination factor Rho [Ensembl]. Rho termination factor, ATP synthase alpha/beta family [Interproscan].

Gene families : OG_02_0000812 (OrthoFinder) Phylogenetic Tree(s): OG0000812_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: AEA93634
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
AGT26584 N559_5002 transcription termination factor Rho [Ensembl].... 0.03 OrthoFinder
AHY40363 rho, CJ8421_05765 transcription termination factor Rho [Ensembl]. Rho... 0.03 OrthoFinder
AKI50481 rho, L2625_02671 transcription termination factor [Ensembl]. ATPase, Rho... 0.07 OrthoFinder
CBI66301 rho, HPB8_744 Transcription termination factor Rho [Ensembl]. Rho... 0.02 OrthoFinder
CPD24908 rho, ERS093114_02386 transcription termination factor [Ensembl]. Rho... 0.03 OrthoFinder
EDJ90502 rho, CGSHi22421_06377 transcription termination factor Rho [Ensembl]. Rho... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006353 DNA-templated transcription, termination IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Enrichment
MF GO:0004810 tRNA adenylyltransferase activity IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006275 regulation of DNA replication IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006284 base-excision repair IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
MF GO:0008144 drug binding IEP Enrichment
BP GO:0008610 lipid biosynthetic process IEP Enrichment
MF GO:0008658 penicillin binding IEP Enrichment
MF GO:0009982 pseudouridine synthase activity IEP Enrichment
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
MF GO:0031406 carboxylic acid binding IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
MF GO:0033218 amide binding IEP Enrichment
MF GO:0033293 monocarboxylic acid binding IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
MF GO:0043772 acyl-phosphate glycerol-3-phosphate acyltransferase activity IEP Enrichment
BP GO:0044255 cellular lipid metabolic process IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
MF GO:1901681 sulfur compound binding IEP Enrichment
MF GO:1990817 RNA adenylyltransferase activity IEP Enrichment
InterPro domains Description Start Stop
IPR011112 Rho_N 9 51
IPR000194 ATPase_F1/V1/A1_a/bsu_nucl-bd 159 363
IPR011113 Rho_RNA-bd 55 128
No external refs found!