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AEA94238 (OG1RF_11551)


Aliases : OG1RF_11551

Description : phospotransferase system PTS, mannose-specific IIB component [Ensembl]. PTS system sorbose subfamily IIB component [Interproscan].


Gene families : OG_02_0000075 (OrthoFinder) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AEA94238
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
AAK98864 spr0060, PTS-EIIB Phosphotransferase system sugar-specific EIIB component... 0.04 OrthoFinder
AAK99097 spr0293, PTS-EII Phosphotransferase system sugar-specific EII component... 0.04 OrthoFinder
AKI47998 L2625_00022 PTS system, mannose/fructose/sorbose family, IIB... 0.04 OrthoFinder
CCL19761 BN171_3460005 PTS system, mannose/fructose/sorbose IIB component... 0.04 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm IEA Interproscan
MF GO:0008982 protein-N(PI)-phosphohistidine-sugar phosphotransferase activity IEA Interproscan
BP GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Enrichment
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Enrichment
MF GO:0004817 cysteine-tRNA ligase activity IEP Enrichment
BP GO:0005976 polysaccharide metabolic process IEP Enrichment
BP GO:0006423 cysteinyl-tRNA aminoacylation IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
BP GO:0016226 iron-sulfur cluster assembly IEP Enrichment
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Enrichment
BP GO:0031163 metallo-sulfur cluster assembly IEP Enrichment
InterPro domains Description Start Stop
IPR004720 PTS_IIB_sorbose-sp 5 153
No external refs found!