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  5. AEA95244

AEA95244 (trmE, OG1RF_12557)


Aliases : trmE, OG1RF_12557

Description : tRNA modification GTPase TrmE [Ensembl]. MnmE helical domain, 50S ribosome-binding GTPase, GTP-binding protein TrmE N-terminus [Interproscan].


Gene families : OG_02_0000630 (OrthoFinder) Phylogenetic Tree(s): OG0000630_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AEA95244
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
CPC69467 mnmE, ERS093114_01080 tRNA (5-carboxymethylaminomethyl-2-thiouridylate)... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0002949 tRNA threonylcarbamoyladenosine modification IEP Enrichment
MF GO:0004181 metallocarboxypeptidase activity IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
BP GO:0006011 UDP-glucose metabolic process IEP Enrichment
BP GO:0006282 regulation of DNA repair IEP Enrichment
BP GO:0006310 DNA recombination IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006400 tRNA modification IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
MF GO:0008176 tRNA (guanine-N7-)-methyltransferase activity IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008235 metalloexopeptidase activity IEP Enrichment
BP GO:0009225 nucleotide-sugar metabolic process IEP Enrichment
CC GO:0009379 Holliday junction helicase complex IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Enrichment
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Enrichment
MF GO:0030170 pyridoxal phosphate binding IEP Enrichment
MF GO:0031072 heat shock protein binding IEP Enrichment
CC GO:0033202 DNA helicase complex IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0048583 regulation of response to stimulus IEP Enrichment
BP GO:0051052 regulation of DNA metabolic process IEP Enrichment
MF GO:0070279 vitamin B6 binding IEP Enrichment
BP GO:0070525 tRNA threonylcarbamoyladenosine metabolic process IEP Enrichment
BP GO:0080134 regulation of response to stress IEP Enrichment
BP GO:0080135 regulation of cellular response to stress IEP Enrichment
BP GO:2001020 regulation of response to DNA damage stimulus IEP Enrichment
InterPro domains Description Start Stop
IPR018948 GTP-bd_TrmE_N 10 130
IPR006073 GTP-bd 231 341
IPR025867 MnmE_helical 133 462
No external refs found!