1. Home
  2. Species
  3. Escherichia coli
  4. Sequence
  5. AAC73169

AAC73169 (rluA, b0058)


Aliases : rluA, b0058

Description : dual specificity 23S rRNA pseudouridine(746), tRNA pseudouridine(32) synthase, SAM-dependent [Ensembl]. RNA pseudouridylate synthase [Interproscan].


Gene families : OG_02_0000046 (OrthoFinder) Phylogenetic Tree(s): OG0000046_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AAC73169
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
AAL19059 STM0095, rluA 23S rRNA pseudouridylate 746 synthase [Ensembl]. RNA... 0.13 OrthoFinder
AAL20116 STM1187, rluC 23S rRNA pseudouridylate synthase [Ensembl]. S4 domain,... 0.03 OrthoFinder
AGT25983 N559_4373 23S rRNA/tRNA pseudouridine s 23S rRNA/tRNA... 0.02 OrthoFinder
AKP15182 rluC, WX61_01129 Ribosomal large subunit pseudouridine synthase C... 0.01 OrthoFinder
CCG26588 No alias Ribosomal large subunit pseudouridine synthase D... 0.01 OrthoFinder
CCG26788 YjbO Similar to ribosomal large subunit pseudouridine... 0.01 OrthoFinder
CRN66355 rluD Ribosomal large subunit pseudouridine synthase D... 0.01 OrthoFinder
CRO95170 rluA_1 Ribosomal large subunit pseudouridine synthase A... 0.03 OrthoFinder
EDJ90258 metN, CGSHi22421_06444 DL-methionine transporter ATP-binding subunit [Ensembl].... 0.03 OrthoFinder
EDJ90580 CGSHi22421_01207 SfhB [Ensembl]. S4 domain, RNA pseudouridylate synthase... 0.01 OrthoFinder
EDJ91587 CGSHi22421_07447 23S rRNA pseudouridylate synthase C [Ensembl]. S4... 0.02 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEA Interproscan
MF GO:0003723 RNA binding IEA Interproscan
BP GO:0009451 RNA modification IEA Interproscan
MF GO:0009982 pseudouridine synthase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
MF GO:0008173 RNA methyltransferase activity IEP Enrichment
MF GO:0008649 rRNA methyltransferase activity IEP Enrichment
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
MF GO:0140102 catalytic activity, acting on a rRNA IEP Enrichment
InterPro domains Description Start Stop
IPR006145 PsdUridine_synth_RsuA/RluA 22 169
UniProtKB P0AA37