Coexpression cluster: Cluster_63 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0042430 indole-containing compound metabolic process 40.0% (2/5) 10.01 1e-06 1.8e-05
GO:0006586 indolalkylamine metabolic process 40.0% (2/5) 10.01 1e-06 1.8e-05
GO:0006568 tryptophan metabolic process 40.0% (2/5) 10.01 1e-06 1.8e-05
GO:0009308 amine metabolic process 40.0% (2/5) 9.01 5e-06 5.4e-05
GO:0006576 cellular biogenic amine metabolic process 40.0% (2/5) 9.01 5e-06 5.4e-05
GO:0044106 cellular amine metabolic process 40.0% (2/5) 9.01 5e-06 5.4e-05
GO:0009072 aromatic amino acid family metabolic process 40.0% (2/5) 8.68 8e-06 7.7e-05
GO:0006520 cellular amino acid metabolic process 60.0% (3/5) 5.42 2.6e-05 0.000229
GO:0043436 oxoacid metabolic process 60.0% (3/5) 4.98 6.5e-05 0.000464
GO:0019752 carboxylic acid metabolic process 60.0% (3/5) 4.98 6.5e-05 0.000464
GO:0006082 organic acid metabolic process 60.0% (3/5) 4.9 7.6e-05 0.00049
GO:1901605 alpha-amino acid metabolic process 40.0% (2/5) 6.25 0.000263 0.001557
GO:0044281 small molecule metabolic process 60.0% (3/5) 4.04 0.000456 0.00249
GO:0006725 cellular aromatic compound metabolic process 60.0% (3/5) 3.57 0.001172 0.004161
GO:0046483 heterocycle metabolic process 60.0% (3/5) 3.61 0.001094 0.004316
GO:0004640 phosphoribosylanthranilate isomerase activity 20.0% (1/5) 10.01 0.000973 0.004316
GO:0004425 indole-3-glycerol-phosphate synthase activity 20.0% (1/5) 10.01 0.000973 0.004316
GO:0004834 tryptophan synthase activity 20.0% (1/5) 10.01 0.000973 0.004316
GO:1901360 organic cyclic compound metabolic process 60.0% (3/5) 3.58 0.001159 0.00433
GO:1901564 organonitrogen compound metabolic process 60.0% (3/5) 3.62 0.001069 0.004464
GO:0008152 metabolic process 80.0% (4/5) 2.56 0.001504 0.005086
GO:0034641 cellular nitrogen compound metabolic process 60.0% (3/5) 3.42 0.001615 0.005214
GO:0016829 lyase activity 40.0% (2/5) 4.74 0.002151 0.006639
GO:0006807 nitrogen compound metabolic process 60.0% (3/5) 2.92 0.004396 0.013005
GO:0044238 primary metabolic process 60.0% (3/5) 2.67 0.007176 0.019596
GO:0044237 cellular metabolic process 60.0% (3/5) 2.67 0.007134 0.02026
GO:0003824 catalytic activity 80.0% (4/5) 1.93 0.008099 0.021298
GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses 20.0% (1/5) 6.84 0.008726 0.022127
GO:0016860 intramolecular oxidoreductase activity 20.0% (1/5) 6.68 0.009692 0.023728
GO:0071704 organic substance metabolic process 60.0% (3/5) 2.38 0.012707 0.030073
GO:0016836 hydro-lyase activity 20.0% (1/5) 6.1 0.014509 0.033231
GO:0016835 carbon-oxygen lyase activity 20.0% (1/5) 5.92 0.016431 0.036457
GO:0016757 glycosyltransferase activity 20.0% (1/5) 5.76 0.01835 0.038319
GO:0016831 carboxy-lyase activity 20.0% (1/5) 5.76 0.01835 0.038319
GO:0006418 tRNA aminoacylation for protein translation 20.0% (1/5) 5.55 0.021222 0.043051
GO:0004812 aminoacyl-tRNA ligase activity 20.0% (1/5) 5.36 0.024088 0.043853
GO:0016875 ligase activity, forming carbon-oxygen bonds 20.0% (1/5) 5.36 0.024088 0.043853
GO:0043039 tRNA aminoacylation 20.0% (1/5) 5.42 0.023134 0.044392
GO:0043038 amino acid activation 20.0% (1/5) 5.42 0.023134 0.044392
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Haemophilus influenzae HCCA Cluster_10 0.083 OrthoFinder Compare
Listeria monocytogenes HCCA Cluster_2 0.033 OrthoFinder Compare
Mycobacterium tuberculosis HCCA Cluster_42 0.038 OrthoFinder Compare
Salmonella enterica HCCA Cluster_12 0.029 OrthoFinder Compare
Staphylococcus aureus HCCA Cluster_17 0.072 OrthoFinder Compare
Streptococcus pneumoniae HCCA Cluster_17 0.082 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_30 0.089 OrthoFinder Compare
Sequences (5) (download table)

InterPro Domains

GO Terms

Family Terms