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  5. AAC76814

AAC76814 (xerC, b3811)


Aliases : xerC, b3811

Description : site-specific tyrosine recombinase [Ensembl]. Phage integrase family [Interproscan].


Gene families : OG_02_0000060 (OrthoFinder) Phylogenetic Tree(s): OG0000060_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AAC76814
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
AAL21919 STM3044, xerD site-specific recombinase [Ensembl]. Phage integrase... 0.03 OrthoFinder
AAL22793 STM3949, xerC putative site-specific integrase/recombinase [Ensembl].... 0.2 OrthoFinder
AEA94047 xerC, OG1RF_11360 tyrosine recombinase XerC [Ensembl]. Phage integrase... 0.03 OrthoFinder
AHY40086 CJ8421_04295 integrase-recombinase protein [Ensembl]. Phage integrase... 0.04 OrthoFinder
CBI66435 xerC, HPB8_878 integrase-recombinase protein (XerCD family) [Ensembl].... 0.02 OrthoFinder
CCP44466 Rv1701 Probable integrase/recombinase [Ensembl]. Phage... 0.02 OrthoFinder
CRO99837 xerC_1 Tyrosine recombinase XerC [Ensembl]. Phage integrase... 0.07 OrthoFinder
EDJ90028 CGSHi22421_09661 tyrosine recombinase [Ensembl]. Phage integrase family... 0.03 OrthoFinder
EDJ90488 xerD, CGSHi22421_06307 site-specific tyrosine recombinase XerD [Ensembl]. Phage... 0.04 OrthoFinder
KNA53620 VCV51_030091, XerC tyrosine recombinase XerC [Ensembl]. Phage integrase... 0.05 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006310 DNA recombination IEA Interproscan
BP GO:0015074 DNA integration IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP Enrichment
MF GO:0000166 nucleotide binding IEP Enrichment
BP GO:0001510 RNA methylation IEP Enrichment
BP GO:0001514 selenocysteine incorporation IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004852 uroporphyrinogen-III synthase activity IEP Enrichment
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006323 DNA packaging IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006417 regulation of translation IEP Enrichment
BP GO:0006451 translational readthrough IEP Enrichment
BP GO:0006553 lysine metabolic process IEP Enrichment
BP GO:0006778 porphyrin-containing compound metabolic process IEP Enrichment
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
BP GO:0007059 chromosome segregation IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
BP GO:0008610 lipid biosynthetic process IEP Enrichment
MF GO:0008649 rRNA methyltransferase activity IEP Enrichment
MF GO:0008837 diaminopimelate epimerase activity IEP Enrichment
MF GO:0008961 phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009085 lysine biosynthetic process IEP Enrichment
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP Enrichment
BP GO:0010608 posttranscriptional regulation of gene expression IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
MF GO:0016757 glycosyltransferase activity IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0016855 racemase and epimerase activity, acting on amino acids and derivatives IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
BP GO:0030261 chromosome condensation IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
BP GO:0031167 rRNA methylation IEP Enrichment
BP GO:0032268 regulation of cellular protein metabolic process IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0033013 tetrapyrrole metabolic process IEP Enrichment
BP GO:0033014 tetrapyrrole biosynthetic process IEP Enrichment
BP GO:0034248 regulation of cellular amide metabolic process IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0036361 racemase activity, acting on amino acids and derivatives IEP Enrichment
BP GO:0042157 lipoprotein metabolic process IEP Enrichment
BP GO:0042158 lipoprotein biosynthetic process IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0046451 diaminopimelate metabolic process IEP Enrichment
MF GO:0047661 amino-acid racemase activity IEP Enrichment
BP GO:0051246 regulation of protein metabolic process IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
BP GO:0070475 rRNA base methylation IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:0140102 catalytic activity, acting on a rRNA IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR002104 Integrase_catalytic 113 280
IPR004107 Integrase_SAM-like_N 8 90
UniProtKB P0A8P6