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  5. EDJ90794

EDJ90794 (CGSHi22421_00480)


Aliases : CGSHi22421_00480

Description : predicted methyltransferase [Ensembl]. THUMP domain, Putative RNA methylase family UPF0020, S-adenosylmethionine-dependent methyltransferase [Interproscan].


Gene families : OG_02_0000755 (OrthoFinder) Phylogenetic Tree(s): OG0000755_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EDJ90794
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
AAC74034 rlmL, b0948 23S rRNA m(2)G2445 and m(7)G2069 methyltransferases,... 0.05 OrthoFinder
AEA93616 OG1RF_10929 site-specific DNA-methyltransferase [Ensembl]. THUMP... 0.03 OrthoFinder
AGT24962 N559_3304 23S rRNA m(2)G2445 methyltransferase [Ensembl]. THUMP... 0.03 OrthoFinder
AKI49881 L2625_02030 RNA methylase domain protein [Ensembl]. Putative RNA... 0.04 OrthoFinder
AKP14571 rlmL, WX61_00490 Ribosomal RNA large subunit methyltransferase L... 0.04 OrthoFinder
CCL18022 BN171_2030008 Putative methylase [Ensembl]. Putative RNA methylase... 0.02 OrthoFinder
CRO64256 rlmL Ribosomal RNA large subunit methyltransferase K/L... 0.04 OrthoFinder
KNA55288 VCV51_033101 THUMP domain-containing protein [Ensembl]. THUMP domain,... 0.07 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0008168 methyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003896 DNA primase activity IEP Enrichment
MF GO:0003916 DNA topoisomerase activity IEP Enrichment
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP Enrichment
MF GO:0004797 thymidine kinase activity IEP Enrichment
MF GO:0004813 alanine-tRNA ligase activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006265 DNA topological change IEP Enrichment
BP GO:0006269 DNA replication, synthesis of RNA primer IEP Enrichment
BP GO:0006282 regulation of DNA repair IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006419 alanyl-tRNA aminoacylation IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Enrichment
MF GO:0008144 drug binding IEP Enrichment
MF GO:0008658 penicillin binding IEP Enrichment
MF GO:0009029 tetraacyldisaccharide 4'-kinase activity IEP Enrichment
CC GO:0009379 Holliday junction helicase complex IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
BP GO:0017004 cytochrome complex assembly IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0019136 deoxynucleoside kinase activity IEP Enrichment
MF GO:0019206 nucleoside kinase activity IEP Enrichment
MF GO:0020037 heme binding IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
BP GO:0030258 lipid modification IEP Enrichment
BP GO:0030259 lipid glycosylation IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0031406 carboxylic acid binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
CC GO:0033202 DNA helicase complex IEP Enrichment
MF GO:0033218 amide binding IEP Enrichment
MF GO:0033293 monocarboxylic acid binding IEP Enrichment
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
MF GO:0035596 methylthiotransferase activity IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
MF GO:0043177 organic acid binding IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
MF GO:0046906 tetrapyrrole binding IEP Enrichment
BP GO:0048583 regulation of response to stimulus IEP Enrichment
MF GO:0050497 alkylthioltransferase activity IEP Enrichment
BP GO:0051052 regulation of DNA metabolic process IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
BP GO:0070085 glycosylation IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
BP GO:0080134 regulation of response to stress IEP Enrichment
BP GO:0080135 regulation of cellular response to stress IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
CC GO:1904949 ATPase complex IEP Enrichment
BP GO:2001020 regulation of response to DNA damage stimulus IEP Enrichment
InterPro domains Description Start Stop
IPR019614 SAM-dep_methyl-trfase 465 656
IPR000241 RNA_methylase_dom 162 374
IPR004114 THUMP_dom 18 153
No external refs found!