EDJ91115 (CGSHi22421_10252)


Aliases : CGSHi22421_10252

Description : RNA polymerase sigma factor [Ensembl]. AAA+ lid domain, FtsH Extracellular, Peptidase family M41, ATPase family associated with various cellular activities (AAA) [Interproscan].


Gene families : OG_02_0000217 (OrthoFinder) Phylogenetic Tree(s): OG0000217_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EDJ91115
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
AAC76210 ftsH, b3178 protease, ATP-dependent zinc-metallo [Ensembl]. AAA+ lid... 0.17 OrthoFinder
AGT22377 N559_0579 ATP-dependent metalloprotease [Ensembl]. AAA+ lid... 0.06 OrthoFinder
CRO20823 ftsH_2 ATP-dependent zinc metalloprotease FtsH [Ensembl]. AAA+... 0.11 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Enrichment
MF GO:0004140 dephospho-CoA kinase activity IEP Enrichment
MF GO:0004176 ATP-dependent peptidase activity IEP Enrichment
MF GO:0004298 threonine-type endopeptidase activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005839 proteasome core complex IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
BP GO:0009060 aerobic respiration IEP Enrichment
BP GO:0015936 coenzyme A metabolic process IEP Enrichment
BP GO:0015937 coenzyme A biosynthetic process IEP Enrichment
BP GO:0015980 energy derivation by oxidation of organic compounds IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
BP GO:0017038 protein import IEP Enrichment
BP GO:0019646 aerobic electron transport chain IEP Enrichment
BP GO:0022900 electron transport chain IEP Enrichment
BP GO:0022904 respiratory electron transport chain IEP Enrichment
MF GO:0030234 enzyme regulator activity IEP Enrichment
MF GO:0031072 heat shock protein binding IEP Enrichment
BP GO:0032259 methylation IEP Enrichment
BP GO:0033866 nucleoside bisphosphate biosynthetic process IEP Enrichment
BP GO:0034030 ribonucleoside bisphosphate biosynthetic process IEP Enrichment
BP GO:0034033 purine nucleoside bisphosphate biosynthetic process IEP Enrichment
MF GO:0042802 identical protein binding IEP Enrichment
MF GO:0042803 protein homodimerization activity IEP Enrichment
BP GO:0045333 cellular respiration IEP Enrichment
MF GO:0051082 unfolded protein binding IEP Enrichment
MF GO:0051087 chaperone binding IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Enrichment
MF GO:0060590 ATPase regulator activity IEP Enrichment
MF GO:0070003 threonine-type peptidase activity IEP Enrichment
CC GO:0070069 cytochrome complex IEP Enrichment
MF GO:0098772 molecular function regulator IEP Enrichment
InterPro domains Description Start Stop
IPR011546 Pept_M41_FtsH_extracell 6 93
IPR003959 ATPase_AAA_core 187 319
IPR000642 Peptidase_M41 400 591
IPR041569 AAA_lid_3 342 386
No external refs found!