EDJ91115 (CGSHi22421_10252)

Aliases : CGSHi22421_10252

Description : RNA polymerase sigma factor [Ensembl]. AAA+ lid domain, FtsH Extracellular, Peptidase family M41, ATPase family associated with various cellular activities (AAA) [Interproscan].

Gene families : OG_02_0000217 (OrthoFinder) Phylogenetic Tree(s): OG0000217_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: EDJ91115
Cluster	HCCA: Cluster_18

Target	Alias	Description	ECC score	Gene Family Method
AAC76210	ftsH, b3178	protease, ATP-dependent zinc-metallo [Ensembl]. AAA+ lid...	0.17	OrthoFinder
AGT22377	N559_0579	ATP-dependent metalloprotease [Ensembl]. AAA+ lid...	0.06	OrthoFinder
CRO20823	ftsH_2	ATP-dependent zinc metalloprotease FtsH [Ensembl]. AAA+...	0.11	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004175	endopeptidase activity	None	Extended
MF	GO:0004222	metalloendopeptidase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006508	proteolysis	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008237	metallopeptidase activity	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
CC	GO:0016021	integral component of membrane	IEA	Interproscan
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000774	adenyl-nucleotide exchange factor activity	IEP	Enrichment
MF	GO:0004140	dephospho-CoA kinase activity	IEP	Enrichment
MF	GO:0004176	ATP-dependent peptidase activity	IEP	Enrichment
MF	GO:0004298	threonine-type endopeptidase activity	IEP	Enrichment
MF	GO:0005515	protein binding	IEP	Enrichment
CC	GO:0005839	proteasome core complex	IEP	Enrichment
BP	GO:0006457	protein folding	IEP	Enrichment
MF	GO:0008168	methyltransferase activity	IEP	Enrichment
BP	GO:0009060	aerobic respiration	IEP	Enrichment
BP	GO:0015936	coenzyme A metabolic process	IEP	Enrichment
BP	GO:0015937	coenzyme A biosynthetic process	IEP	Enrichment
BP	GO:0015980	energy derivation by oxidation of organic compounds	IEP	Enrichment
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	Enrichment
BP	GO:0017038	protein import	IEP	Enrichment
BP	GO:0019646	aerobic electron transport chain	IEP	Enrichment
BP	GO:0022900	electron transport chain	IEP	Enrichment
BP	GO:0022904	respiratory electron transport chain	IEP	Enrichment
MF	GO:0030234	enzyme regulator activity	IEP	Enrichment
MF	GO:0031072	heat shock protein binding	IEP	Enrichment
BP	GO:0032259	methylation	IEP	Enrichment
BP	GO:0033866	nucleoside bisphosphate biosynthetic process	IEP	Enrichment
BP	GO:0034030	ribonucleoside bisphosphate biosynthetic process	IEP	Enrichment
BP	GO:0034033	purine nucleoside bisphosphate biosynthetic process	IEP	Enrichment
MF	GO:0042802	identical protein binding	IEP	Enrichment
MF	GO:0042803	protein homodimerization activity	IEP	Enrichment
BP	GO:0045333	cellular respiration	IEP	Enrichment
MF	GO:0051082	unfolded protein binding	IEP	Enrichment
MF	GO:0051087	chaperone binding	IEP	Enrichment
BP	GO:0051603	proteolysis involved in cellular protein catabolic process	IEP	Enrichment
MF	GO:0060589	nucleoside-triphosphatase regulator activity	IEP	Enrichment
MF	GO:0060590	ATPase regulator activity	IEP	Enrichment
MF	GO:0070003	threonine-type peptidase activity	IEP	Enrichment
CC	GO:0070069	cytochrome complex	IEP	Enrichment
MF	GO:0098772	molecular function regulator	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR011546	Pept_M41_FtsH_extracell	6	93
IPR003959	ATPase_AAA_core	187	319
IPR000642	Peptidase_M41	400	591
IPR041569	AAA_lid_3	342	386

External Links

No external refs found!

EDJ91115 (CGSHi22421_10252)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation