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  5. EDJ91679

EDJ91679 (CGSHi22421_07988)


Aliases : CGSHi22421_07988

Description : predicted cation/multidrug efflux pump [Ensembl]. AcrB/AcrD/AcrF family [Interproscan].


Gene families : OG_02_0000054 (OrthoFinder) Phylogenetic Tree(s): OG0000054_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EDJ91679
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
AAC73564 acrB, b0462 multidrug efflux system protein [Ensembl].... 0.04 OrthoFinder
AAC75136 mdtB, b2075 multidrug efflux system, subunit B [Ensembl].... 0.04 OrthoFinder
AAC75523 acrD, b2470 aminoglycoside/multidrug efflux system [Ensembl].... 0.04 OrthoFinder
AAL21031 STM2127, yegN putative outer membrane receptor [Ensembl].... 0.04 OrthoFinder
AAL21032 STM2128, yegO putative resistance protein [Ensembl]. AcrB/AcrD/AcrF... 0.03 OrthoFinder
AAL21375 STM2481, acrD RND family aminoglycoside/multidrug efflux pump... 0.06 OrthoFinder
AGT23030 N559_1266 RND family multidrug efflux permease protein OqxB3... 0.02 OrthoFinder
AGT23206 N559_1451 aminoglycoside/multidrug efflux system [Ensembl].... 0.04 OrthoFinder
AGT23472 N559_1731, MdtC multidrug efflux system subunit MdtC [Ensembl].... 0.02 OrthoFinder
AGT23937 N559_2226 acridine efflux pump [Ensembl]. 0.06 OrthoFinder
AGT25399 N559_3763 putative acridine efflux pump [Ensembl]. AcrB/AcrD/AcrF... 0.04 OrthoFinder
AKP14428 mexB, WX61_00346 Multidrug resistance protein MexB [Ensembl].... 0.04 OrthoFinder
CCL18817 BN171_2660006 Putative multidrug efflux pump [Ensembl]. AcrB/AcrD/AcrF... 0.04 OrthoFinder
CRN65212 acrB_1 Acriflavine resistance protein B [Ensembl].... 0.09 OrthoFinder
CRO09457 bepE_1 Efflux pump membrane transporter BepE [Ensembl].... 0.04 OrthoFinder
CRO58919 bepE_2 Efflux pump membrane transporter BepE [Ensembl].... 0.04 OrthoFinder
CRO88282 mexB Multidrug-efflux transporter MexB [Ensembl].... 0.06 OrthoFinder
CRP58341 mdtB_2 Multidrug transporter MdtB [Ensembl]. AcrB/AcrD/AcrF... 0.15 OrthoFinder
CRP65676 bepE_3 Efflux pump membrane transporter BepE [Ensembl].... 0.04 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0004673 protein histidine kinase activity IEP Enrichment
BP GO:0006352 DNA-templated transcription, initiation IEP Enrichment
BP GO:0006355 regulation of transcription, DNA-templated IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
BP GO:0008616 queuosine biosynthetic process IEP Enrichment
BP GO:0009119 ribonucleoside metabolic process IEP Enrichment
BP GO:0009163 nucleoside biosynthetic process IEP Enrichment
BP GO:0009889 regulation of biosynthetic process IEP Enrichment
BP GO:0010468 regulation of gene expression IEP Enrichment
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Enrichment
BP GO:0015833 peptide transport IEP Enrichment
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Enrichment
MF GO:0016987 sigma factor activity IEP Enrichment
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0019222 regulation of metabolic process IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
BP GO:0031323 regulation of cellular metabolic process IEP Enrichment
BP GO:0031326 regulation of cellular biosynthetic process IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
BP GO:0042455 ribonucleoside biosynthetic process IEP Enrichment
BP GO:0042886 amide transport IEP Enrichment
BP GO:0046116 queuosine metabolic process IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051252 regulation of RNA metabolic process IEP Enrichment
BP GO:0060255 regulation of macromolecule metabolic process IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
BP GO:0080090 regulation of primary metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment
MF GO:0140299 small molecule sensor activity IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901659 glycosyl compound biosynthetic process IEP Enrichment
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Enrichment
BP GO:2001141 regulation of RNA biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR001036 Acrflvin-R 4 1009
No external refs found!