EDJ91937 (CGSHi22421_09278)

Aliases : CGSHi22421_09278

Description : UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase [Ensembl]. Mur ligase family, Mur ligase middle domain [Interproscan].

Gene families : OG_02_0000864 (OrthoFinder) Phylogenetic Tree(s): OG0000864_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: EDJ91937
Cluster	HCCA: Cluster_11

Target	Alias	Description	ECC score	Gene Family Method
AAL19087	STM0123, murE	UDP-N-acetylmuramoylalanyl-D-glutamate...	0.06	OrthoFinder
CRP08619	murE	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,...	0.05	OrthoFinder
KNA53282	VCV51_033343	UDP-N-acetylmuramyl-tripeptide synthetase [Ensembl]. Mur...	0.05	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	IEA	Interproscan
MF	GO:0016874	ligase activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0001514	selenocysteine incorporation	IEP	Enrichment
MF	GO:0003887	DNA-directed DNA polymerase activity	IEP	Enrichment
MF	GO:0004177	aminopeptidase activity	IEP	Enrichment
MF	GO:0004347	glucose-6-phosphate isomerase activity	IEP	Enrichment
MF	GO:0004590	orotidine-5'-phosphate decarboxylase activity	IEP	Enrichment
BP	GO:0006206	pyrimidine nucleobase metabolic process	IEP	Enrichment
BP	GO:0006207	'de novo' pyrimidine nucleobase biosynthetic process	IEP	Enrichment
BP	GO:0006260	DNA replication	IEP	Enrichment
BP	GO:0006451	translational readthrough	IEP	Enrichment
MF	GO:0008235	metalloexopeptidase activity	IEP	Enrichment
MF	GO:0008237	metallopeptidase activity	IEP	Enrichment
MF	GO:0008238	exopeptidase activity	IEP	Enrichment
MF	GO:0008716	D-alanine-D-alanine ligase activity	IEP	Enrichment
CC	GO:0009360	DNA polymerase III complex	IEP	Enrichment
MF	GO:0015501	glutamate:sodium symporter activity	IEP	Enrichment
BP	GO:0015800	acidic amino acid transport	IEP	Enrichment
BP	GO:0015807	L-amino acid transport	IEP	Enrichment
BP	GO:0015813	L-glutamate transmembrane transport	IEP	Enrichment
BP	GO:0019856	pyrimidine nucleobase biosynthetic process	IEP	Enrichment
MF	GO:0030145	manganese ion binding	IEP	Enrichment
MF	GO:0034061	DNA polymerase activity	IEP	Enrichment
CC	GO:0042575	DNA polymerase complex	IEP	Enrichment
CC	GO:0061695	transferase complex, transferring phosphorus-containing groups	IEP	Enrichment
CC	GO:0140535	intracellular protein-containing complex	IEP	Enrichment
BP	GO:1902475	L-alpha-amino acid transmembrane transport	IEP	Enrichment
CC	GO:1902494	catalytic complex	IEP	Enrichment
CC	GO:1990234	transferase complex	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR013221	Mur_ligase_cen	5	176
IPR004101	Mur_ligase_C	198	282

External Links

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EDJ91937 (CGSHi22421_09278)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation