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  5. EDJ91938

EDJ91938 (murE, CGSHi22421_09283)


Aliases : murE, CGSHi22421_09283

Description : UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase [Ensembl]. Mur ligase family, Mur ligase middle domain [Interproscan].


Gene families : OG_02_0000378 (OrthoFinder) Phylogenetic Tree(s): OG0000378_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EDJ91938
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AAC73197 murF, b0086 UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine... 0.08 OrthoFinder
AAL19088 STM0124, murF D-alanine:D-alanine-adding enzyme [Ensembl]. Mur ligase... 0.07 OrthoFinder
AGT25953 N559_4340 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine... 0.07 OrthoFinder
AHY40010 CJ8421_03905 Mur ligase family protein [Ensembl]. Mur ligase middle... 0.04 OrthoFinder
AKI48804 murF, L2625_00877 UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine... 0.03 OrthoFinder
AKP14610 murF, WX61_00529 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine... 0.04 OrthoFinder
CBI66504 murF, HPB8_947 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,... 0.03 OrthoFinder
CCG27254 No alias UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate... 0.03 OrthoFinder
CCL19117 murF, BN171_2870047 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine... 0.02 OrthoFinder
CCP44933 murF, Rv2157c Probable UDP-N-acetylmuramoylalanyl-D-glutamyl-2,... 0.03 OrthoFinder
CPD23446 murF, ERS093114_02347 UDP-N-acetylmuramoylalanyl-D-glutamyl-2%2C6-diaminopimela... 0.02 OrthoFinder
CRP08587 murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine... 0.08 OrthoFinder
KNA53283 VCV51_031618 UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine... 0.07 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0009058 biosynthetic process IEA Interproscan
MF GO:0016874 ligase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0002949 tRNA threonylcarbamoyladenosine modification IEP Enrichment
MF GO:0003887 DNA-directed DNA polymerase activity IEP Enrichment
MF GO:0004356 glutamate-ammonia ligase activity IEP Enrichment
MF GO:0004359 glutaminase activity IEP Enrichment
BP GO:0006106 fumarate metabolic process IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006541 glutamine metabolic process IEP Enrichment
BP GO:0006542 glutamine biosynthetic process IEP Enrichment
MF GO:0008716 D-alanine-D-alanine ligase activity IEP Enrichment
MF GO:0008759 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity IEP Enrichment
MF GO:0008852 exodeoxyribonuclease I activity IEP Enrichment
CC GO:0009360 DNA polymerase III complex IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
MF GO:0015291 secondary active transmembrane transporter activity IEP Enrichment
MF GO:0015297 antiporter activity IEP Enrichment
MF GO:0015501 glutamate:sodium symporter activity IEP Enrichment
BP GO:0015800 acidic amino acid transport IEP Enrichment
BP GO:0015807 L-amino acid transport IEP Enrichment
BP GO:0015813 L-glutamate transmembrane transport IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Enrichment
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Enrichment
BP GO:0017003 protein-heme linkage IEP Enrichment
BP GO:0017006 protein-tetrapyrrole linkage IEP Enrichment
MF GO:0019213 deacetylase activity IEP Enrichment
MF GO:0020037 heme binding IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
MF GO:0022853 active ion transmembrane transporter activity IEP Enrichment
BP GO:0030258 lipid modification IEP Enrichment
BP GO:0030259 lipid glycosylation IEP Enrichment
MF GO:0034061 DNA polymerase activity IEP Enrichment
CC GO:0042575 DNA polymerase complex IEP Enrichment
BP GO:0042816 vitamin B6 metabolic process IEP Enrichment
BP GO:0042819 vitamin B6 biosynthetic process IEP Enrichment
BP GO:0042822 pyridoxal phosphate metabolic process IEP Enrichment
BP GO:0042823 pyridoxal phosphate biosynthetic process IEP Enrichment
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Enrichment
BP GO:0043165 Gram-negative-bacterium-type cell outer membrane assembly IEP Enrichment
BP GO:0046184 aldehyde biosynthetic process IEP Enrichment
MF GO:0046906 tetrapyrrole binding IEP Enrichment
BP GO:0051301 cell division IEP Enrichment
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Enrichment
BP GO:0070085 glycosylation IEP Enrichment
BP GO:0070525 tRNA threonylcarbamoyladenosine metabolic process IEP Enrichment
BP GO:0071709 membrane assembly IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
CC GO:0140535 intracellular protein-containing complex IEP Enrichment
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Enrichment
BP GO:1902475 L-alpha-amino acid transmembrane transport IEP Enrichment
CC GO:1990234 transferase complex IEP Enrichment
InterPro domains Description Start Stop
IPR013221 Mur_ligase_cen 108 295
IPR004101 Mur_ligase_C 315 397
IPR000713 Mur_ligase_N 25 94
No external refs found!