1. Home
  2. Species
  3. Helicobacter pylori
  4. Sequence
  5. CBI66823

CBI66823 (rplU, HPB8_1266)


Aliases : rplU, HPB8_1266

Description : large subunit ribosomal protein L21 [Ensembl]. Ribosomal prokaryotic L21 protein [Interproscan].


Gene families : OG_02_0000351 (OrthoFinder) Phylogenetic Tree(s): OG0000351_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CBI66823
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
AAC76218 rplU, b3186 50S ribosomal subunit protein L21 [Ensembl]. Ribosomal... 0.1 OrthoFinder
AAK99816 spr1012, rplU 50S Ribosomal protein L21 [Ensembl]. Ribosomal... 0.04 OrthoFinder
AAL22173 STM3304, rplU 50S ribosomal subunit protein L21 [Ensembl]. Ribosomal... 0.11 OrthoFinder
ADK86995 rplU, MPNE_0378 ribosomal protein L21 [Ensembl]. Ribosomal prokaryotic... 0.03 OrthoFinder
AEA93390 rplU, OG1RF_10703 50S ribosomal protein L21 [Ensembl]. Ribosomal... 0.12 OrthoFinder
AGT22369 N559_0571 50S ribosomal protein L21 [Ensembl]. 0.03 OrthoFinder
AHY39367 rplU, CJ8421_00480 50S ribosomal protein L21 [Ensembl]. Ribosomal... 0.15 OrthoFinder
AKI49539 rplU, L2625_01644 ribosomal protein L21 [Ensembl]. Ribosomal protein... 0.04 OrthoFinder
AKP14815 rplU, WX61_00743 50S ribosomal protein L21 [Ensembl]. Ribosomal... 0.04 OrthoFinder
CCG26583 No alias LSU ribosomal protein L21p [Ensembl]. Ribosomal... 0.05 OrthoFinder
CCL17311 rplU, BN171_1430038 50S ribosomal protein L21 [Ensembl]. Ribosomal... 0.05 OrthoFinder
CCP45235 rplU, Rv2442c 50S ribosomal protein L21 RplU [Ensembl]. Ribosomal... 0.04 OrthoFinder
CPC84926 rplU, ERS093114_01477 50S ribosomal protein L21 [Ensembl]. Ribosomal... 0.12 OrthoFinder
CRN65825 rplU 50S ribosomal protein L21 [Ensembl]. Ribosomal... 0.09 OrthoFinder
KNA50264 VCV51_033695 ribosomal protein L21 [Ensembl]. Ribosomal prokaryotic... 0.07 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0003922 GMP synthase (glutamine-hydrolyzing) activity IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004298 threonine-type endopeptidase activity IEP Enrichment
MF GO:0004497 monooxygenase activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005839 proteasome core complex IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
MF GO:0008320 protein transmembrane transporter activity IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
MF GO:0015399 primary active transmembrane transporter activity IEP Enrichment
MF GO:0015450 P-P-bond-hydrolysis-driven protein transmembrane transporter activity IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Enrichment
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
MF GO:0018580 nitronate monooxygenase activity IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
MF GO:0022884 macromolecule transmembrane transporter activity IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
MF GO:0070003 threonine-type peptidase activity IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
MF GO:0140318 protein transporter activity IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR028909 L21p-like 3 102
UniProtKB D7FF66