AGT22212 (N559_0399)


Aliases : N559_0399

Description : tryptophanyl-tRNA synthetase [Ensembl].


Gene families : OG_02_0000248 (OrthoFinder) Phylogenetic Tree(s): OG0000248_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT22212
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
AAC76409 trpS, b3384 tryptophanyl-tRNA synthetase [Ensembl]. tRNA synthetases... 0.08 OrthoFinder
AAL22343 STM3481, trpS tryptophan tRNA synthetase [Ensembl]. tRNA synthetases... 0.06 OrthoFinder
AHY39644 CJ8421_01945 tryptophanyl-tRNA ligase [Ensembl]. tRNA synthetases... 0.02 OrthoFinder
AKP15927 trpS, WX61_01897 Tryptophan--tRNA ligase [Ensembl]. tRNA synthetases... 0.02 OrthoFinder
CCL19071 trpS, BN171_2870001 Tryptophanyl-tRNA synthetase (Tryptophan--tRNA ligase)... 0.03 OrthoFinder
CCP46157 trpS, Rv3336c Probable tryptophanyl-tRNA synthetase TrpS... 0.02 OrthoFinder
EDJ90225 CGSHi22421_05037 tryptophanyl-tRNA synthetase [Ensembl]. tRNA synthetases... 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA Interproscan
MF GO:0004812 aminoacyl-tRNA ligase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006418 tRNA aminoacylation for protein translation IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Enrichment
MF GO:0004150 dihydroneopterin aldolase activity IEP Enrichment
MF GO:0004520 endodeoxyribonuclease activity IEP Enrichment
MF GO:0004807 triose-phosphate isomerase activity IEP Enrichment
BP GO:0006012 galactose metabolic process IEP Enrichment
MF GO:0008108 UDP-glucose:hexose-1-phosphate uridylyltransferase activity IEP Enrichment
BP GO:0008614 pyridoxine metabolic process IEP Enrichment
BP GO:0008615 pyridoxine biosynthetic process IEP Enrichment
BP GO:0009246 enterobacterial common antigen biosynthetic process IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
BP GO:0018208 peptidyl-proline modification IEP Enrichment
CC GO:0019867 outer membrane IEP Enrichment
MF GO:0030151 molybdenum ion binding IEP Enrichment
MF GO:0030599 pectinesterase activity IEP Enrichment
MF GO:0033856 pyridoxine 5'-phosphate synthase activity IEP Enrichment
BP GO:0042545 cell wall modification IEP Enrichment
BP GO:0042816 vitamin B6 metabolic process IEP Enrichment
BP GO:0042819 vitamin B6 biosynthetic process IEP Enrichment
BP GO:0043165 Gram-negative-bacterium-type cell outer membrane assembly IEP Enrichment
BP GO:0046378 enterobacterial common antigen metabolic process IEP Enrichment
BP GO:0061024 membrane organization IEP Enrichment
BP GO:0070206 protein trimerization IEP Enrichment
MF GO:0070569 uridylyltransferase activity IEP Enrichment
BP GO:0071709 membrane assembly IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR002305 aa-tRNA-synth_Ic 1 264
No external refs found!