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  5. CCL16927

CCL16927 (BN171_1000001)


Aliases : BN171_1000001

Description : ABC-type transport system, aminoacid-family extracellular solute-binding protein [Ensembl]. Bacterial extracellular solute-binding proteins [Interproscan].


Gene families : OG_02_0000028 (OrthoFinder) Phylogenetic Tree(s): OG0000028_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCL16927
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
AAC73898 glnH, b0811 glutamine transporter subunit [Ensembl]. Bacterial... 0.03 OrthoFinder
AAC73947 artJ, b0860 arginine ABC transporter periplasmic binding protein... 0.05 OrthoFinder
AAC73950 artI, b0863 arginine transporter subunit [Ensembl]. Bacterial... 0.12 OrthoFinder
AAC74987 tcyJ, b1920 cystine transporter subunit [Ensembl]. Bacterial... 0.03 OrthoFinder
AAC75369 hisJ, b2309 histidine ABC transporter periplasmic binding protein... 0.04 OrthoFinder
AAC75370 argT, b2310 lysine/arginine/ornithine transporter subunit [Ensembl].... 0.04 OrthoFinder
AAK98905 spr0101, ABC-SBP ABC transporter solute-binding protein-amino acid... 0.04 OrthoFinder
AAL00055 spr1251, glnH ABC transporter substrate-binding... 0.05 OrthoFinder
AAL00157 spr1353, glnH ABC transporter substrate-binding protein-glutamine... 0.02 OrthoFinder
AAL19766 STM0830, glnH glutamine high-affinity transporter [Ensembl]. Bacterial... 0.07 OrthoFinder
AAL19822 STM0887, artJ arginine 3rd transport system [Ensembl]. Bacterial... 0.04 OrthoFinder
AAL19825 STM0890, artI arginine transport system [Ensembl]. Bacterial... 0.1 OrthoFinder
AAL21255 STM2354, hisJ histidine transport protein [Ensembl]. Bacterial... 0.05 OrthoFinder
AAL21256 STM2355, argT lysine/arginine/ornithine transport protein [Ensembl].... 0.08 OrthoFinder
AGT23304 N559_1552 lysine-arginine-ornithine-binding periplasmic protein... 0.06 OrthoFinder
AGT23305 N559_1553 histidine ABC transporter periplasmic substrate-binding... 0.04 OrthoFinder
AGT23574 N559_1841 cystine transporter subunit [Ensembl]. Solute-binding... 0.06 OrthoFinder
AGT23903 N559_2191 amino acid ABC transport system periplasmic binding... 0.03 OrthoFinder
AGT25037 N559_3384 arginine 3rd transport system periplasmic binding... 0.04 OrthoFinder
AGT25040 N559_3387 arginine 3rd transport system periplasmic binding... 0.05 OrthoFinder
AGT25391 N559_3755 ABC transporter, substrate-binding protein, family 3... 0.03 OrthoFinder
AGT25453 N559_3817 amino acid ABC transporter periplasmic amino... 0.04 OrthoFinder
AKI49732 L2625_01873 amino acid ABC transporter, amino acid-binding protein... 0.03 OrthoFinder
AKI50283 L2625_02451 polar amino acid ABC transporter, substrate-binding... 0.02 OrthoFinder
AKP15747 WX61_01712 putative amino-acid ABC transporter-binding protein... 0.06 OrthoFinder
CBI66165 yckK, HPB8_608 putative polar amino acid transport system... 0.03 OrthoFinder
CCG26201 No alias Cysteine ABC transporter, substrate-binding protein... 0.04 OrthoFinder
CCG26409 No alias Amino acid ABC transporter, amino acid-binding protein... 0.02 OrthoFinder
CCG27099 FliY Cystine ABC transporter, periplasmic cystine-binding... 0.06 OrthoFinder
CCL18016 BN171_2030002 ABC-type transport system, aminoacid-family... 0.07 OrthoFinder
CCL18562 BN171_2440003 ABC-type transport system,cystine/aminoacid-family... 0.05 OrthoFinder
CCL18566 BN171_2440007 ABC-type transport system,cystine/aminoacid-family... 0.06 OrthoFinder
CPD19875 ERS093114_02271 Cysteine ABC transporter%2C substrate-binding protein... 0.06 OrthoFinder
CRO48561 hisJ Histidine-binding periplasmic protein precursor... 0.03 OrthoFinder
EDJ90649 CGSHi22421_04048 arginine transporter permease subunit ArtQ [Ensembl].... 0.05 OrthoFinder
EDJ91875 CGSHi22421_08968 CTP synthetase [Ensembl]. Bacterial extracellular... 0.03 OrthoFinder
KNA53745 VCV51_033271 bacterial extracellular solute-binding protein, family 3... 0.02 OrthoFinder
KNA58916 VCV51_031259 lysine-arginine-ornithine-binding periplasmic protein... 0.04 OrthoFinder
KNA59810 VCV51_030870 lysine-arginine-ornithine-binding periplasmic protein... 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0004055 argininosuccinate synthase activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR001638 Solute-binding_3/MltF_N 41 261
UniProtKB U3WRM3