AGT22657 (N559_0868, IclR)

Aliases : N559_0868, IclR

Description : putative regulatory protein, IclR [Ensembl]. IclR helix-turn-helix domain [InterProScan].

Gene families : OG_02_0002501 (OrthoFinder) Phylogenetic Tree(s): OG0002501_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AGT22657
Cluster	HCCA: Cluster_3

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003824	catalytic activity	IEP	Enrichment
MF	GO:0003994	aconitate hydratase activity	IEP	Enrichment
MF	GO:0004356	glutamate-ammonia ligase activity	IEP	Enrichment
MF	GO:0004565	beta-galactosidase activity	IEP	Enrichment
MF	GO:0004611	phosphoenolpyruvate carboxykinase activity	IEP	Enrichment
MF	GO:0004612	phosphoenolpyruvate carboxykinase (ATP) activity	IEP	Enrichment
MF	GO:0005283	amino acid:sodium symporter activity	IEP	Enrichment
MF	GO:0005343	organic acid:sodium symporter activity	IEP	Enrichment
MF	GO:0005416	amino acid:cation symporter activity	IEP	Enrichment
BP	GO:0005996	monosaccharide metabolic process	IEP	Enrichment
BP	GO:0006012	galactose metabolic process	IEP	Enrichment
BP	GO:0006525	arginine metabolic process	IEP	Enrichment
BP	GO:0006527	arginine catabolic process	IEP	Enrichment
BP	GO:0006810	transport	IEP	Enrichment
BP	GO:0008104	protein localization	IEP	Enrichment
MF	GO:0008791	arginine N-succinyltransferase activity	IEP	Enrichment
MF	GO:0009015	N-succinylarginine dihydrolase activity	IEP	Enrichment
BP	GO:0009063	cellular amino acid catabolic process	IEP	Enrichment
BP	GO:0009064	glutamine family amino acid metabolic process	IEP	Enrichment
BP	GO:0009065	glutamine family amino acid catabolic process	IEP	Enrichment
BP	GO:0009306	protein secretion	IEP	Enrichment
CC	GO:0009341	beta-galactosidase complex	IEP	Enrichment
BP	GO:0009435	NAD biosynthetic process	IEP	Enrichment
BP	GO:0015031	protein transport	IEP	Enrichment
MF	GO:0015370	solute:sodium symporter activity	IEP	Enrichment
MF	GO:0015501	glutamate:sodium symporter activity	IEP	Enrichment
CC	GO:0015627	type II protein secretion system complex	IEP	Enrichment
BP	GO:0015628	protein secretion by the type II secretion system	IEP	Enrichment
BP	GO:0015800	acidic amino acid transport	IEP	Enrichment
BP	GO:0015807	L-amino acid transport	IEP	Enrichment
BP	GO:0015813	L-glutamate transmembrane transport	IEP	Enrichment
MF	GO:0015925	galactosidase activity	IEP	Enrichment
MF	GO:0015926	glucosidase activity	IEP	Enrichment
MF	GO:0016211	ammonia ligase activity	IEP	Enrichment
MF	GO:0016491	oxidoreductase activity	IEP	Enrichment
MF	GO:0016624	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor	IEP	Enrichment
MF	GO:0016638	oxidoreductase activity, acting on the CH-NH2 group of donors	IEP	Enrichment
MF	GO:0016748	succinyltransferase activity	IEP	Enrichment
MF	GO:0016749	N-succinyltransferase activity	IEP	Enrichment
MF	GO:0016813	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines	IEP	Enrichment
MF	GO:0016835	carbon-oxygen lyase activity	IEP	Enrichment
MF	GO:0016836	hydro-lyase activity	IEP	Enrichment
MF	GO:0016880	acid-ammonia (or amide) ligase activity	IEP	Enrichment
BP	GO:0019318	hexose metabolic process	IEP	Enrichment
BP	GO:0019359	nicotinamide nucleotide biosynthetic process	IEP	Enrichment
BP	GO:0019362	pyridine nucleotide metabolic process	IEP	Enrichment
BP	GO:0019363	pyridine nucleotide biosynthetic process	IEP	Enrichment
BP	GO:0032940	secretion by cell	IEP	Enrichment
CC	GO:0032991	protein-containing complex	IEP	Enrichment
BP	GO:0033036	macromolecule localization	IEP	Enrichment
MF	GO:0033735	aspartate dehydrogenase activity	IEP	Enrichment
BP	GO:0035592	establishment of protein localization to extracellular region	IEP	Enrichment
BP	GO:0045184	establishment of protein localization	IEP	Enrichment
BP	GO:0046496	nicotinamide nucleotide metabolic process	IEP	Enrichment
BP	GO:0046903	secretion	IEP	Enrichment
BP	GO:0051179	localization	IEP	Enrichment
BP	GO:0051234	establishment of localization	IEP	Enrichment
MF	GO:0051536	iron-sulfur cluster binding	IEP	Enrichment
MF	GO:0051537	2 iron, 2 sulfur cluster binding	IEP	Enrichment
MF	GO:0051540	metal cluster binding	IEP	Enrichment
BP	GO:0055085	transmembrane transport	IEP	Enrichment
BP	GO:0055114	obsolete oxidation-reduction process	IEP	Enrichment
BP	GO:0071692	protein localization to extracellular region	IEP	Enrichment
BP	GO:0071702	organic substance transport	IEP	Enrichment
BP	GO:0071705	nitrogen compound transport	IEP	Enrichment
BP	GO:0071806	protein transmembrane transport	IEP	Enrichment
BP	GO:0098776	protein transport across the cell outer membrane	IEP	Enrichment
BP	GO:0140352	export from cell	IEP	Enrichment
BP	GO:1901606	alpha-amino acid catabolic process	IEP	Enrichment
BP	GO:1902475	L-alpha-amino acid transmembrane transport	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR005471	Tscrpt_reg_IclR_N	14	63
IPR014757	Tscrpt_reg_IclR_C	132	252

External Links

No external refs found!

AGT22657 (N559_0868, IclR)

Expression Profile

Co-expression Networks

Functional Annotation