AGT22846 (N559_1069, FucR)

Aliases : N559_1069, FucR

Description : DNA-binding transcriptional activator FucR [Ensembl]. DeoR C terminal sensor domain, DeoR-like helix-turn-helix domain, DeoR-type HTH domain [InterProScan].

Gene families : OG_02_0000026 (OrthoFinder) Phylogenetic Tree(s): OG0000026_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: AGT22846
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
AAC75749 srlR, b2707 sorbitol-inducible srl operon transcriptional repressor... 0.05 OrthoFinder
AAC75847 fucR, b2805 l-fucose operon activator [Ensembl]. DeoR C terminal... 0.05 OrthoFinder
AAC77148 ulaR, b4191 transcriptional repressor for the L-ascorbate... 0.03 OrthoFinder
AAK99871 spr1067, lacR Lactose phosphotransferase system repressor [Ensembl].... 0.04 OrthoFinder
AAL00776 spr1974, fcsR Regulator of fucose operon [Ensembl]. DeoR C terminal... 0.03 OrthoFinder
AAL21717 STM2837, srlR transcriptional repressor for glucitol operon [Ensembl].... 0.04 OrthoFinder
AAL21799 STM2919, ygbI putative regulatory protein, deoR family [Ensembl]. DeoR... 0.07 OrthoFinder
AAL22864 STM4025, yihW putative glycerol-3-phosphate regulon repressor... 0.06 OrthoFinder
AAL23201 STM4381, yjfQ putative transcriptional repressor [Ensembl]. DeoR C... 0.03 OrthoFinder
AKI48322 L2625_00376 transcriptional regulator, DeoR family [Ensembl]. DeoR... 0.04 OrthoFinder
AKI48342 iolR, L2625_00397 transcriptional regulator, DeoR family [Ensembl]. DeoR... 0.03 OrthoFinder
AKI50105 glcR, L2625_02263 transcriptional regulator of sugar metabolism, DeoR... 0.03 OrthoFinder
CCG26300 No alias Transcriptional regulator, DeoR family [Ensembl]. DeoR C... 0.04 OrthoFinder
CCG27005 No alias Lactose phosphotransferase system repressor [Ensembl].... 0.03 OrthoFinder
CRP66538 glpR_2 Glycerol-3-phosphate regulon repressor [Ensembl]. DeoR C... 0.02 OrthoFinder
KNA52275 VCV51_033441 deoR family Bacterial regulatory protein [Ensembl]. DeoR... 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Enrichment
MF GO:0000155 phosphorelay sensor kinase activity IEP Enrichment
BP GO:0000160 phosphorelay signal transduction system IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003855 3-dehydroquinate dehydratase activity IEP Enrichment
MF GO:0003941 L-serine ammonia-lyase activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0004673 protein histidine kinase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
BP GO:0006040 amino sugar metabolic process IEP Enrichment
BP GO:0006050 mannosamine metabolic process IEP Enrichment
BP GO:0006051 N-acetylmannosamine metabolic process IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
BP GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system IEP Enrichment
BP GO:0010565 regulation of cellular ketone metabolic process IEP Enrichment
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Enrichment
BP GO:0019216 regulation of lipid metabolic process IEP Enrichment
BP GO:0019217 regulation of fatty acid metabolic process IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
MF GO:0043565 sequence-specific DNA binding IEP Enrichment
MF GO:0047465 N-acylglucosamine-6-phosphate 2-epimerase activity IEP Enrichment
BP GO:0062012 regulation of small molecule metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0120227 acyl-CoA binding IEP Enrichment
MF GO:0140299 small molecule sensor activity IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
MF GO:1901567 fatty acid derivative binding IEP Enrichment
InterPro domains Description Start Stop
IPR014036 DeoR_C 76 232
IPR001034 DeoR_HTH 5 60
No external refs found!