AGT22846 (N559_1069, FucR)

Aliases : N559_1069, FucR

Description : DNA-binding transcriptional activator FucR [Ensembl]. DeoR C terminal sensor domain, DeoR-like helix-turn-helix domain, DeoR-type HTH domain [InterProScan].

Gene families : OG_02_0000026 (OrthoFinder) Phylogenetic Tree(s): OG0000026_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AGT22846
Cluster	HCCA: Cluster_19

Target	Alias	Description	ECC score	Gene Family Method
AAC75749	srlR, b2707	sorbitol-inducible srl operon transcriptional repressor...	0.05	OrthoFinder
AAC75847	fucR, b2805	l-fucose operon activator [Ensembl]. DeoR C terminal...	0.05	OrthoFinder
AAC77148	ulaR, b4191	transcriptional repressor for the L-ascorbate...	0.03	OrthoFinder
AAK99871	spr1067, lacR	Lactose phosphotransferase system repressor [Ensembl]....	0.04	OrthoFinder
AAL00776	spr1974, fcsR	Regulator of fucose operon [Ensembl]. DeoR C terminal...	0.03	OrthoFinder
AAL21717	STM2837, srlR	transcriptional repressor for glucitol operon [Ensembl]....	0.04	OrthoFinder
AAL21799	STM2919, ygbI	putative regulatory protein, deoR family [Ensembl]. DeoR...	0.07	OrthoFinder
AAL22864	STM4025, yihW	putative glycerol-3-phosphate regulon repressor...	0.06	OrthoFinder
AAL23201	STM4381, yjfQ	putative transcriptional repressor [Ensembl]. DeoR C...	0.03	OrthoFinder
AKI48322	L2625_00376	transcriptional regulator, DeoR family [Ensembl]. DeoR...	0.04	OrthoFinder
AKI48342	iolR, L2625_00397	transcriptional regulator, DeoR family [Ensembl]. DeoR...	0.03	OrthoFinder
AKI50105	glcR, L2625_02263	transcriptional regulator of sugar metabolism, DeoR...	0.03	OrthoFinder
CCG26300	No alias	Transcriptional regulator, DeoR family [Ensembl]. DeoR C...	0.04	OrthoFinder
CCG27005	No alias	Lactose phosphotransferase system repressor [Ensembl]....	0.03	OrthoFinder
CRP66538	glpR_2	Glycerol-3-phosphate regulon repressor [Ensembl]. DeoR C...	0.02	OrthoFinder
KNA52275	VCV51_033441	deoR family Bacterial regulatory protein [Ensembl]. DeoR...	0.04	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000062	fatty-acyl-CoA binding	IEP	Enrichment
MF	GO:0000155	phosphorelay sensor kinase activity	IEP	Enrichment
BP	GO:0000160	phosphorelay signal transduction system	IEP	Enrichment
MF	GO:0003676	nucleic acid binding	IEP	Enrichment
MF	GO:0003677	DNA binding	IEP	Enrichment
MF	GO:0003855	3-dehydroquinate dehydratase activity	IEP	Enrichment
MF	GO:0003941	L-serine ammonia-lyase activity	IEP	Enrichment
MF	GO:0004672	protein kinase activity	IEP	Enrichment
MF	GO:0004673	protein histidine kinase activity	IEP	Enrichment
MF	GO:0005488	binding	IEP	Enrichment
BP	GO:0006040	amino sugar metabolic process	IEP	Enrichment
BP	GO:0006050	mannosamine metabolic process	IEP	Enrichment
BP	GO:0006051	N-acetylmannosamine metabolic process	IEP	Enrichment
BP	GO:0007165	signal transduction	IEP	Enrichment
BP	GO:0009401	phosphoenolpyruvate-dependent sugar phosphotransferase system	IEP	Enrichment
BP	GO:0010565	regulation of cellular ketone metabolic process	IEP	Enrichment
MF	GO:0016775	phosphotransferase activity, nitrogenous group as acceptor	IEP	Enrichment
BP	GO:0019216	regulation of lipid metabolic process	IEP	Enrichment
BP	GO:0019217	regulation of fatty acid metabolic process	IEP	Enrichment
BP	GO:0035556	intracellular signal transduction	IEP	Enrichment
MF	GO:0043565	sequence-specific DNA binding	IEP	Enrichment
MF	GO:0047465	N-acylglucosamine-6-phosphate 2-epimerase activity	IEP	Enrichment
BP	GO:0062012	regulation of small molecule metabolic process	IEP	Enrichment
MF	GO:0097159	organic cyclic compound binding	IEP	Enrichment
MF	GO:0120227	acyl-CoA binding	IEP	Enrichment
MF	GO:0140299	small molecule sensor activity	IEP	Enrichment
MF	GO:1901363	heterocyclic compound binding	IEP	Enrichment
MF	GO:1901567	fatty acid derivative binding	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR014036	DeoR_C	76	232
IPR001034	DeoR_HTH	5	60

External Links

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AGT22846 (N559_1069, FucR)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation