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  5. AGT23308

AGT23308 (N559_1556)


Aliases : N559_1556

Description : histidine/lysine/arginine/ornithine transporter subunit [Ensembl].


Gene families : OG_02_0000004 (OrthoFinder) Phylogenetic Tree(s): OG0000004_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT23308
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AAC73310 metN, b0199 DL-methionine transporter subunit [Ensembl]. NIL domain,... 0.14 OrthoFinder
AAC73753 gltL, b0652 glutamate/aspartate ABC transporter ATPase [Ensembl].... 0.08 OrthoFinder
AAC73951 artP, b0864 arginine ABC transporter ATPase [Ensembl]. ABC... 0.06 OrthoFinder
AAC74984 tcyN, b1917 putative ABC transporter ATPase [Ensembl]. ABC... 0.11 OrthoFinder
AAC75366 hisP, b2306 histidine ABC transporter ATPase [Ensembl]. ABC... 0.13 OrthoFinder
AAK99426 spr0622, glnQ ABC transporter ATP-binding protein-glutamine transport... 0.03 OrthoFinder
AAL00118 spr1314, ABC-NDB ABC transporter ATP-binding protein-aspartate/glutamate... 0.03 OrthoFinder
AAL00158 spr1354, glnQ ABC transporter ATP-binding protein-glutamine transport... 0.03 OrthoFinder
AAL19210 STM0247, abc putative ABC superfamily (atp_bind) transport system... 0.05 OrthoFinder
AAL19465 STM0511, sfbB putative ABC-type transport system ATPase component/cell... 0.2 OrthoFinder
AAL19613 STM0662, gltL glutamate/aspartate transporter [Ensembl]. ABC... 0.21 OrthoFinder
AAL19826 STM0891, artP arginine transport system [Ensembl]. ABC transporter... 0.07 OrthoFinder
AAL21252 STM2351, hisP histidine and lysine/arginine/ornithine transport... 0.13 OrthoFinder
AEA93225 OG1RF_10538 ABC superfamily ATP binding cassette transporter, ABC... 0.03 OrthoFinder
AGT24090 N559_2393 putative ATP-binding component of a transport system [Ensembl]. 0.02 OrthoFinder
AKI49733 L2625_01874 amino acid ABC transporter, ATP-binding protein... 0.1 OrthoFinder
AKI50280 hisP, L2625_02448 polar amino acid ABC transporter, ATP-binding protein... 0.07 OrthoFinder
AKP15644 glnQ_2, WX61_01606 Glutamine transport ATP-binding protein GlnQ [Ensembl].... 0.03 OrthoFinder
CCL16929 BN171_1000003 ABC-type transport system, aminoacid-family ATP-binding... 0.04 OrthoFinder
CCL18018 BN171_2030004 ABC-type transport system, aminoacid-family ATP-binding... 0.03 OrthoFinder
CCL18560 BN171_2440001 ABC-type transport system,cystine/aminoacid-family... 0.06 OrthoFinder
CPD19941 tcyC, ERS093114_02273 amino acid ABC transporter%2C ATP-binding protein... 0.02 OrthoFinder
CPD30941 glnQ, ERS093114_02522 Glutamine transport ATP-binding protein glnQ [Ensembl].... 0.01 OrthoFinder
CPD33665 metN_2, ERS093114_02598 ABC transporter ATP-binding protein [Ensembl]. NIL... 0.06 OrthoFinder
CRN71228 hisP_1 Histidine transport ATP-binding protein HisP [Ensembl].... 0.02 OrthoFinder
CRO39434 glnQ_1 Glutamine transport ATP-binding protein GlnQ [Ensembl].... 0.09 OrthoFinder
CRO48464 hisP_2 Histidine transport ATP-binding protein HisP [Ensembl].... 0.02 OrthoFinder
CRO59431 glnQ_2 Glutamine transport ATP-binding protein GlnQ [Ensembl].... 0.02 OrthoFinder
CRP49267 occP Octopine permease ATP-binding protein P [Ensembl]. ABC... 0.05 OrthoFinder
EDJ90253 CGSHi22421_06419 probable D-methionine transport ATP-binding protein... 0.03 OrthoFinder
KNA53743 VCV51_033269 amino acid ABC transporter [Ensembl]. ABC transporter... 0.08 OrthoFinder
KNA56297 VCV51_030617 D-methionine ABC transporter [Ensembl]. NIL domain, ABC... 0.08 OrthoFinder
KNA58915 VCV51_031260 amino acid ABC transporter [Ensembl]. ABC transporter... 0.05 OrthoFinder
KNA59809 VCV51_030869 arginine ABC transporter [Ensembl]. ABC transporter... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP Enrichment
MF GO:0000287 magnesium ion binding IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003852 2-isopropylmalate synthase activity IEP Enrichment
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP Enrichment
MF GO:0003879 ATP phosphoribosyltransferase activity IEP Enrichment
MF GO:0004345 glucose-6-phosphate dehydrogenase activity IEP Enrichment
MF GO:0004356 glutamate-ammonia ligase activity IEP Enrichment
MF GO:0004399 histidinol dehydrogenase activity IEP Enrichment
MF GO:0004424 imidazoleglycerol-phosphate dehydratase activity IEP Enrichment
MF GO:0004635 phosphoribosyl-AMP cyclohydrolase activity IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006536 glutamate metabolic process IEP Enrichment
BP GO:0006537 glutamate biosynthetic process IEP Enrichment
BP GO:0006541 glutamine metabolic process IEP Enrichment
BP GO:0006542 glutamine biosynthetic process IEP Enrichment
BP GO:0006547 histidine metabolic process IEP Enrichment
BP GO:0006551 leucine metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0006808 regulation of nitrogen utilization IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0007267 cell-cell signaling IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
MF GO:0008519 ammonium transmembrane transporter activity IEP Enrichment
BP GO:0008652 cellular amino acid biosynthetic process IEP Enrichment
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009064 glutamine family amino acid metabolic process IEP Enrichment
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Enrichment
BP GO:0009086 methionine biosynthetic process IEP Enrichment
BP GO:0009098 leucine biosynthetic process IEP Enrichment
BP GO:0009372 quorum sensing IEP Enrichment
BP GO:0009595 detection of biotic stimulus IEP Enrichment
BP GO:0009607 response to biotic stimulus IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0015696 ammonium transport IEP Enrichment
MF GO:0015930 glutamate synthase activity IEP Enrichment
BP GO:0015977 carbon fixation IEP Enrichment
BP GO:0016053 organic acid biosynthetic process IEP Enrichment
MF GO:0016211 ammonia ligase activity IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Enrichment
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP Enrichment
MF GO:0016846 carbon-sulfur lyase activity IEP Enrichment
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Enrichment
MF GO:0019238 cyclohydrolase activity IEP Enrichment
BP GO:0019627 urea metabolic process IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
BP GO:0023052 signaling IEP Enrichment
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
BP GO:0043419 urea catabolic process IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0043605 cellular amide catabolic process IEP Enrichment
BP GO:0043650 dicarboxylic acid biosynthetic process IEP Enrichment
MF GO:0043768 S-ribosylhomocysteine lyase activity IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0044283 small molecule biosynthetic process IEP Enrichment
BP GO:0046394 carboxylic acid biosynthetic process IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
MF GO:0051287 NAD binding IEP Enrichment
BP GO:0051606 detection of stimulus IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
BP GO:0060245 detection of cell density IEP Enrichment
BP GO:0071941 nitrogen cycle metabolic process IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
BP GO:1901605 alpha-amino acid metabolic process IEP Enrichment
BP GO:1901607 alpha-amino acid biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 21 181
No external refs found!