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  5. AGT23904

AGT23904 (N559_2192)


Aliases : N559_2192

Description : amino acid ABC transporter [Ensembl]. transmembrane domain MetI-like [InterProScan].


Gene families : OG_02_0000016 (OrthoFinder) Phylogenetic Tree(s): OG0000016_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT23904
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AAC73754 gltK, b0653 glutamate/aspartate ABC transporter permease [Ensembl].... 0.02 OrthoFinder
AAC73949 artQ, b0862 arginine ABC transporter permease [Ensembl].... 0.07 OrthoFinder
AAC74985 tcyL, b1918 ABC family putative inner membrane permease [Ensembl].... 0.15 OrthoFinder
AAK99336 spr0532, glnP ABC transporter membrane-spanning permease-glutamine... 0.02 OrthoFinder
AAK99337 spr0533, glnP ABC transporter membrane-spanning permease-glutamine... 0.03 OrthoFinder
AAK99428 spr0624, glnP ABC transporter membrane-spanning permease-glutamine... 0.05 OrthoFinder
AAK99531 spr0727, glnP ABC transporter membrane-spanning permease-glutamine... 0.02 OrthoFinder
AAL00119 spr1315, ABC-MSP ABC transporter membrane-spanning... 0.04 OrthoFinder
AAL19614 STM0663, gltK glutamate/aspartate transporter [Ensembl].... 0.05 OrthoFinder
AAL19765 STM0829, glnP glutamine high-affinity transporter [Ensembl].... 0.12 OrthoFinder
AAL19824 STM0889, artQ arginine 3rd transport system [Ensembl].... 0.11 OrthoFinder
AAL20864 STM1952, yecS putative ABC-type amino acid transporter [Ensembl].... 0.04 OrthoFinder
AEA93582 OG1RF_10895 glutamine ABC superfamily ATP binding cassette... 0.03 OrthoFinder
AEA93583 OG1RF_10896 amino acid ABC superfamily ATP binding cassette... 0.04 OrthoFinder
AGT24089 N559_2392 ABC transporter, permease protein [Ensembl].... 0.03 OrthoFinder
AGT24219 N559_2537 glutamine ABC transporter permease component [Ensembl].... 0.03 OrthoFinder
AHY40132 CJ8421_04545 amino acid ABC transporter permease [Ensembl].... 0.03 OrthoFinder
AHY40133 CJ8421_04550 ABC-type amino-acid transporter permease [Ensembl].... 0.04 OrthoFinder
AKI49734 L2625_01875 amino acid ABC transporter, permease protein [Ensembl].... 0.05 OrthoFinder
AKI50248 L2625_02415 amino acid ABC transporter, amino acid-binding/permease... 0.03 OrthoFinder
AKI50281 L2625_02449 polar amino acid ABC transporter, permease protein... 0.09 OrthoFinder
AKI50282 L2625_02450 polar amino acid ABC transporter, permease protein... 0.09 OrthoFinder
AKP15748 tcyB, WX61_01713 L-cystine transport system permease protein TcyB... 0.03 OrthoFinder
CBI66166 yckJ, HPB8_609 putative polar amino acid transport system permease... 0.02 OrthoFinder
CCG26871 No alias ABC transporter membrane-spanning permease-glutamine... 0.03 OrthoFinder
CCL16928 BN171_1000002 ABC-type transport system, aminoacid-family permease... 0.03 OrthoFinder
CCL18017 BN171_2030003 ABC-type transport system, aminoacid-family permease... 0.03 OrthoFinder
CCL18563 BN171_2440004 ABC-type transport system,cystine/aminoacid-family... 0.06 OrthoFinder
CCL18564 BN171_2440005 ABC-type transport system,cystine/aminoacid-family... 0.06 OrthoFinder
CPD19910 tcyB, ERS093114_02272 cystine transport system permease protein [Ensembl].... 0.03 OrthoFinder
CPD30896 artQ, ERS093114_02521 extracellular glutamine-binding protein [Ensembl].... 0.02 OrthoFinder
CRO59374 glnM_3 putative glutamine ABC transporter permease protein GlnM... 0.03 OrthoFinder
CRO59397 yhdY Inner membrane amino-acid ABC transporter permease... 0.02 OrthoFinder
CRP60552 yecS_3 Inner membrane amino-acid ABC transporter permease... 0.03 OrthoFinder
CRP60578 yecS_4 Inner membrane amino-acid ABC transporter permease... 0.05 OrthoFinder
EDJ90647 CGSHi22421_04038 arginine ABC transporter permease protein [Ensembl].... 0.04 OrthoFinder
KNA53744 VCV51_033270 His/Glu/Gln/Arg/opine family amino ABC transporter... 0.03 OrthoFinder
KNA58918 VCV51_031257 His/Glu/Gln/Arg/opine family amino ABC transporter... 0.05 OrthoFinder
KNA59811 VCV51_030871 binding-protein-dependent transport system inner... 0.07 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Enrichment
BP GO:0000105 histidine biosynthetic process IEP Enrichment
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0000287 magnesium ion binding IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003852 2-isopropylmalate synthase activity IEP Enrichment
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP Enrichment
MF GO:0003879 ATP phosphoribosyltransferase activity IEP Enrichment
MF GO:0004055 argininosuccinate synthase activity IEP Enrichment
MF GO:0004399 histidinol dehydrogenase activity IEP Enrichment
MF GO:0004424 imidazoleglycerol-phosphate dehydratase activity IEP Enrichment
MF GO:0004489 methylenetetrahydrofolate reductase (NAD(P)H) activity IEP Enrichment
MF GO:0004635 phosphoribosyl-AMP cyclohydrolase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006526 arginine biosynthetic process IEP Enrichment
BP GO:0006536 glutamate metabolic process IEP Enrichment
BP GO:0006537 glutamate biosynthetic process IEP Enrichment
BP GO:0006547 histidine metabolic process IEP Enrichment
BP GO:0006551 leucine metabolic process IEP Enrichment
BP GO:0006555 methionine metabolic process IEP Enrichment
BP GO:0006790 sulfur compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
BP GO:0008652 cellular amino acid biosynthetic process IEP Enrichment
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009064 glutamine family amino acid metabolic process IEP Enrichment
BP GO:0009066 aspartate family amino acid metabolic process IEP Enrichment
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Enrichment
BP GO:0009086 methionine biosynthetic process IEP Enrichment
BP GO:0009098 leucine biosynthetic process IEP Enrichment
MF GO:0015930 glutamate synthase activity IEP Enrichment
BP GO:0015977 carbon fixation IEP Enrichment
BP GO:0016053 organic acid biosynthetic process IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Enrichment
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0019238 cyclohydrolase activity IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0030976 thiamine pyrophosphate binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0043650 dicarboxylic acid biosynthetic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0044283 small molecule biosynthetic process IEP Enrichment
BP GO:0046394 carboxylic acid biosynthetic process IEP Enrichment
MF GO:0046912 acyltransferase, acyl groups converted into alkyl on transfer IEP Enrichment
MF GO:0051287 NAD binding IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
BP GO:1901605 alpha-amino acid metabolic process IEP Enrichment
BP GO:1901607 alpha-amino acid biosynthetic process IEP Enrichment
MF GO:1901681 sulfur compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR000515 MetI-like 65 248
No external refs found!