AGT24855 (N559_3195)


Aliases : N559_3195

Description : 3-oxoacyl-(acyl carrier protein) synthase II [Ensembl]. C-terminal domain, N-terminal domain [InterProScan].


Gene families : OG_02_0000157 (OrthoFinder) Phylogenetic Tree(s): OG0000157_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT24855
Cluster HCCA: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
AAC74179 fabF, b1095 3-oxoacyl-[acyl-carrier-protein] synthase II [Ensembl].... 0.07 OrthoFinder
AAK99186 spr0382, fabF Beta ketoacyl-acyl carrier protein synthase [Ensembl].... 0.03 OrthoFinder
AAL20126 STM1197, fabF 3-oxoacyl-[acyl-carrier-protein] synthase II [Ensembl].... 0.06 OrthoFinder
AEA94870 fabF2, OG1RF_12183 beta-ketoacyl-acyl-carrier-protein synthase II... 0.03 OrthoFinder
AKI50199 fabF, L2625_02366 beta-ketoacyl-acyl carrier protein synthase II... 0.06 OrthoFinder
AKP15203 fabF_2, WX61_01154 3-oxoacyl-[acyl-carrier-protein] synthase 2 [Ensembl].... 0.04 OrthoFinder
CBI66311 fabF, HPB8_754 3-oxoacyl-[acyl-carrier-protein] synthase II [Ensembl].... 0.03 OrthoFinder
CCG26995 No alias 3-oxoacyl-[acyl-carrier-protein] synthase, KASII... 0.05 OrthoFinder
CCL17336 fabF, BN171_1440020 3-oxoacyl-(acyl-carrier-protein) synthase 2 [Ensembl].... 0.03 OrthoFinder
CPC43985 fabF, ERS093114_00445 3-oxoacyl-[acyl-carrier-protein] synthase%2C KASII... 0.05 OrthoFinder
CRP28678 fabB 3-oxoacyl-[acyl-carrier-protein] synthase 1 [Ensembl].... 0.04 OrthoFinder
KNA50376 VCV51_031410 beta-ketoacyl synthase domain-containing protein... 0.06 OrthoFinder
KNA59664 VCV51_031357 3-oxoacyl-[acyl-carrier-protein] synthase 2 [Ensembl].... 0.07 OrthoFinder

CRP47462 expression graph <div class="tab-pane fade in active" id="tab1default"> <div class="table-responsive"> <table class="table table-striped table-fixed" id="go_table"> <thead> <tr> <th class="col-xs-1" data-sort="string-ins"><span class="sort-icon"></span>Type</th> <th class="col-xs-2" data-sort="string-ins"><span class="sort-icon"></span><abbr title="Click to show help" href="/help/go" data-target="#helpModal">GO</abbr> Term</th> <th class="col-xs-6" data-sort="string-ins"><span class="sort-icon"></span>Name</th> <th class="col-xs-1" data-sort="string-ins"><span class="sort-icon"></span>Evidence</th> <th class="col-xs-2" data-sort="string-ins"><span class="sort-icon"></span>Source</th> </tr> </thead> <tbody> <tr> <td class="col-xs-12"><p>No GO annotation available for this sequence</p></td> </tr> </tbody> </table> </div> <div class="panel-body"> <a href="#" id="go_toggle">Toggle parental</a> </div> </div> <div class="tab-pane fade" id="tab2default"> <div class="table-responsive"> <table class="table table-striped table-fixed" id="predicted_go_table"> <thead> <tr> <th class="col-xs-1" data-sort="string-ins"><span class="sort-icon"></span>Type</th> <th class="col-xs-2" data-sort="string-ins"><span class="sort-icon"></span><abbr title="Click to show help" href="/help/go" data-target="#helpModal">GO</abbr> Term</th> <th class="col-xs-6" data-sort="string-ins"><span class="sort-icon"></span>Name</th> <th class="col-xs-1" data-sort="string-ins"><span class="sort-icon"></span>Evidence</th> <th class="col-xs-2" data-sort="string-ins"><span class="sort-icon"></span>Source</th> </tr> </thead> <tbody> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/136" data-toggle="tooltip" data-placement="top" title=""Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose." [GOC:mah, ISBN:0198547684]">GO:0000166</a></td> <td class="col-xs-6">nucleotide binding</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/2645" data-toggle="tooltip" data-placement="top" title=""Catalysis of the reaction: ATP + H2O = ADP + phosphate; this reaction drives the unwinding of the DNA helix." [EC:3.6.4.12, GOC:jl]">GO:0003678</a></td> <td class="col-xs-6">DNA helicase activity</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/2756" data-toggle="tooltip" data-placement="top" title=""Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic." [GOC:vw, ISBN:0198506732]">GO:0003824</a></td> <td class="col-xs-6">catalytic activity</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/3176" data-toggle="tooltip" data-placement="top" title=""Catalysis of the reaction: acetyl-CoA + n malonyl-CoA + 2n NADPH + 2n H+ = long-chain fatty acid + n+1 CoA + n CO2 + 2n NADP+." [EC:2.3.1.85]">GO:0004312</a></td> <td class="col-xs-6">fatty acid synthase activity</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/3179" data-toggle="tooltip" data-placement="top" title=""Catalysis of the reaction: acyl-[acyl-carrier protein] + malonyl-[acyl-carrier protein] = 3-oxoacyl-[acyl-carrier protein] + CO2 + [acyl-carrier protein]." [EC:2.3.1.41]">GO:0004315</a></td> <td class="col-xs-6">3-oxoacyl-[acyl-carrier-protein] synthase activity</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/3366" data-toggle="tooltip" data-placement="top" title=""Catalysis of the hydrolysis of ester linkages within ribonucleic acid by creating internal breaks." [GOC:mah, ISBN:0198547684]">GO:0004521</a></td> <td class="col-xs-6">endoribonuclease activity</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/3369" data-toggle="tooltip" data-placement="top" title=""Catalysis of the endonucleolytic cleavage of RNA with 5'-phosphomonoesters and 3'-OH termini; makes two staggered cuts in both strands of dsRNA, leaving a 3' overhang of 2 nt." [PMID:11157775, PMID:15242644]">GO:0004525</a></td> <td class="col-xs-6">ribonuclease III activity</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/3381" data-toggle="tooltip" data-placement="top" title=""Catalysis of the hydrolysis of phosphodiester bonds in chains of RNA." [GOC:mah, ISBN:0198547684]">GO:0004540</a></td> <td class="col-xs-6">ribonuclease activity</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/3615" data-toggle="tooltip" data-placement="top" title=""Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of diphosphate and AMP." [ISBN:0198506732]">GO:0004812</a></td> <td class="col-xs-6">aminoacyl-tRNA ligase activity</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/4106" data-toggle="tooltip" data-placement="top" title=""The selective, non-covalent, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule." [GOC:ceb, GOC:mah, ISBN:0198506732]">GO:0005488</a></td> <td class="col-xs-6">binding</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/4133" data-toggle="tooltip" data-placement="top" title=""Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator." [ISBN:0198506732]">GO:0005524</a></td> <td class="col-xs-6">ATP binding</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/4636" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways involving organic acids, any acidic compound containing carbon in covalent linkage." [ISBN:0198506732]">GO:0006082</a></td> <td class="col-xs-6">organic acid metabolic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/4686" data-toggle="tooltip" data-placement="top" title=""Any cellular metabolic process involving nucleobases, nucleosides, nucleotides and nucleic acids." [GOC:ai]">GO:0006139</a></td> <td class="col-xs-6">nucleobase-containing compound metabolic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/4913" data-toggle="tooltip" data-placement="top" title=""Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules." [GOC:mah]">GO:0006396</a></td> <td class="col-xs-6">RNA processing</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/4916" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways involving tRNA, transfer RNA, a class of relatively small RNA molecules responsible for mediating the insertion of amino acids into the sequence of nascent polypeptide chains during protein synthesis. Transfer RNA is characterized by the presence of many unusual minor bases, the function of which has not been completely established." [ISBN:0198506732]">GO:0006399</a></td> <td class="col-xs-6">tRNA metabolic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/4917" data-toggle="tooltip" data-placement="top" title=""The covalent alteration of one or more nucleotides within a tRNA molecule to produce a tRNA molecule with a sequence that differs from that coded genetically." [GOC:curators]">GO:0006400</a></td> <td class="col-xs-6">tRNA modification</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/5019" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways involving amino acids, carboxylic acids containing one or more amino groups, as carried out by individual cells." [ISBN:0198506732]">GO:0006520</a></td> <td class="col-xs-6">cellular amino acid metabolic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/5130" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes." [GOC:mah, ISBN:0198506732]">GO:0006633</a></td> <td class="col-xs-6">fatty acid biosynthetic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/5218" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways involving aromatic compounds, any organic compound characterized by one or more planar rings, each of which contains conjugated double bonds and delocalized pi electrons, as carried out by individual cells." [GOC:ai, ISBN:0198506732]">GO:0006725</a></td> <td class="col-xs-6">cellular aromatic compound metabolic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/6148" data-toggle="tooltip" data-placement="top" title=""Interacting selectively and non-covalently with a drug, any naturally occurring or synthetic substance, other than a nutrient, that, when administered or applied to an organism, affects the structure or functioning of the organism; in particular, any such substance used in the diagnosis, prevention, or treatment of disease." [GOC:jl, ISBN:0198506732]">GO:0008144</a></td> <td class="col-xs-6">drug binding</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/6155" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation." [GOC:go_curators, ISBN:0198547684]">GO:0008152</a></td> <td class="col-xs-6">metabolic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/6589" data-toggle="tooltip" data-placement="top" title=""Interacting selectively and non-covalently with penicillin, any antibiotic that contains the condensed beta-lactamthiazolidine ring system." [GOC:ai]">GO:0008658</a></td> <td class="col-xs-6">penicillin binding</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/6956" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones." [GOC:curators, ISBN:0198547684]">GO:0009058</a></td> <td class="col-xs-6">biosynthetic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">CC</td> <td class="col-xs-2"><a href="/go/view/7180" data-toggle="tooltip" data-placement="top" title=""The region of a virus, bacterial cell, mitochondrion or chloroplast to which the nucleic acid is confined." [GOC:bm, GOC:ma, ISBN:3540076689]">GO:0009295</a></td> <td class="col-xs-6">nucleoid</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/9938" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways resulting in the formation of organic acids, any acidic compound containing carbon in covalent linkage." [ISBN:0198506732]">GO:0016053</a></td> <td class="col-xs-6">organic acid biosynthetic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/9952" data-toggle="tooltip" data-placement="top" title=""The cellular chemical reactions and pathways involving RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage." [ISBN:0198506732]">GO:0016070</a></td> <td class="col-xs-6">RNA metabolic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/10503" data-toggle="tooltip" data-placement="top" title=""Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2." [ISBN:0198506732]">GO:0016740</a></td> <td class="col-xs-6">transferase activity</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/10505" data-toggle="tooltip" data-placement="top" title=""Catalysis of the transfer of a hydroxymethyl- or formyl group from one compound (donor) to another (acceptor)." [EC:2.1.2.-, GOC:mah]">GO:0016742</a></td> <td class="col-xs-6">hydroxymethyl-, formyl- and related transferase activity</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/10525" data-toggle="tooltip" data-placement="top" title=""Catalysis of the transfer of a pentosyl group from one compound (donor) to another (acceptor)." [GOC:jl]">GO:0016763</a></td> <td class="col-xs-6">pentosyltransferase activity</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/10541" data-toggle="tooltip" data-placement="top" title=""Catalysis of the transfer of a sulfur-containing group from one compound (donor) to another (acceptor)." [GOC:jl, ISBN:0198506732]">GO:0016782</a></td> <td class="col-xs-6">transferase activity, transferring sulphur-containing groups</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/10627" data-toggle="tooltip" data-placement="top" title=""Catalysis of the joining of two molecules, or two groups within a single molecule, using the energy from the hydrolysis of ATP, a similar triphosphate, or a pH gradient." [EC:6.-.-.-, GOC:mah]">GO:0016874</a></td> <td class="col-xs-6">ligase activity</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/10628" data-toggle="tooltip" data-placement="top" title=""Catalysis of the joining of two molecules via a carbon-oxygen bond, with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate." [EC:6.1.-.-, GOC:mah]">GO:0016875</a></td> <td class="col-xs-6">ligase activity, forming carbon-oxygen bonds</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/10643" data-toggle="tooltip" data-placement="top" title=""Catalysis of the hydrolysis of ester linkages within ribonucleic acids by creating internal breaks to yield 5'-phosphomonoesters." [GOC:ai]">GO:0016891</a></td> <td class="col-xs-6">endoribonuclease activity, producing 5'-phosphomonoesters</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/10645" data-toggle="tooltip" data-placement="top" title=""Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks to yield 5'-phosphomonoesters." [GOC:mah]">GO:0016893</a></td> <td class="col-xs-6">endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/10779" data-toggle="tooltip" data-placement="top" title=""Interacting selectively and non-covalently with purine nucleotides, any compound consisting of a purine nucleoside esterified with (ortho)phosphate." [GOC:ai]">GO:0017076</a></td> <td class="col-xs-6">purine nucleotide binding</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/12488" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways involving carboxylic acids, any organic acid containing one or more carboxyl (COOH) groups or anions (COO-)." [ISBN:0198506732]">GO:0019752</a></td> <td class="col-xs-6">carboxylic acid metabolic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/13923" data-toggle="tooltip" data-placement="top" title=""Interacting selectively and non-covalently with adenyl nucleotides, any compound consisting of adenosine esterified with (ortho)phosphate." [ISBN:0198506732]">GO:0030554</a></td> <td class="col-xs-6">adenyl nucleotide binding</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/14714" data-toggle="tooltip" data-placement="top" title=""Interacting selectively and non-covalently with a carboxylic acid, any organic acid containing one or more carboxyl (COOH) groups or anions (COO-)." [GOC:mah, ISBN:0198506732]">GO:0031406</a></td> <td class="col-xs-6">carboxylic acid binding</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/15570" data-toggle="tooltip" data-placement="top" title=""Catalysis of the hydrolysis of phosphodiester bonds in double-stranded RNA molecules." [GOC:mah]">GO:0032296</a></td> <td class="col-xs-6">double-stranded RNA-specific ribonuclease activity</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/15805" data-toggle="tooltip" data-placement="top" title=""Interacting selectively and non-covalently with a ribonucleotide, any compound consisting of a ribonucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose moiety." [GOC:mah]">GO:0032553</a></td> <td class="col-xs-6">ribonucleotide binding</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/15807" data-toggle="tooltip" data-placement="top" title=""Interacting selectively and non-covalently with a purine ribonucleotide, any compound consisting of a purine ribonucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose moiety." [GOC:mah]">GO:0032555</a></td> <td class="col-xs-6">purine ribonucleotide binding</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/15811" data-toggle="tooltip" data-placement="top" title=""Interacting selectively and non-covalently with an adenyl ribonucleotide, any compound consisting of adenosine esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose moiety." [GOC:mah]">GO:0032559</a></td> <td class="col-xs-6">adenyl ribonucleotide binding</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/16200" data-toggle="tooltip" data-placement="top" title=""Binds transmembrane domain-containing proteins and mediates their integration into a membrane." [PMID:14739936, PMID:29809151, PMID:30415835, PMID:32459176]">GO:0032977</a></td> <td class="col-xs-6">membrane insertase activity</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/16432" data-toggle="tooltip" data-placement="top" title=""Interacting selectively and non-covalently with an amide, any derivative of an oxoacid in which an acidic hydroxy group has been replaced by an amino or substituted amino group." [GOC:mah]">GO:0033218</a></td> <td class="col-xs-6">amide binding</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/16504" data-toggle="tooltip" data-placement="top" title=""Interacting selectively and non-covalently with a monocarboxylic acid, any organic acid containing one carboxyl (COOH) group or anion (COO-)." [GOC:mah]">GO:0033293</a></td> <td class="col-xs-6">monocarboxylic acid binding</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/17813" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways involving various organic and inorganic nitrogenous compounds, as carried out by individual cells." [GOC:mah]">GO:0034641</a></td> <td class="col-xs-6">cellular nitrogen compound metabolic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/17832" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways involving non-coding RNA transcripts (ncRNAs)." [GOC:mah]">GO:0034660</a></td> <td class="col-xs-6">ncRNA metabolic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/18721" data-toggle="tooltip" data-placement="top" title=""Catalysis of the addition of a methylthioether group (-SCH3) to a nucleic acid or protein acceptor." [GOC:jh2, PMID:20472640]">GO:0035596</a></td> <td class="col-xs-6">methylthiotransferase activity</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/18762" data-toggle="tooltip" data-placement="top" title=""Interacting selectively and non-covalently with a purine ribonucleoside triphosphate, a compound consisting of a purine base linked to a ribose sugar esterified with triphosphate on the sugar." [GOC:BHF, GOC:ebc, ISBN:0198506732]">GO:0035639</a></td> <td class="col-xs-6">purine ribonucleoside triphosphate binding</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/19211" data-toggle="tooltip" data-placement="top" title=""Interacting selectively and non-covalently with a small molecule, any low molecular weight, monomeric, non-encoded molecule." [GOC:curators, GOC:pde, GOC:pm]">GO:0036094</a></td> <td class="col-xs-6">small molecule binding</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/20997" data-toggle="tooltip" data-placement="top" title=""The modification of an amino acid to an active form, for incorporation into a peptide, protein or other macromolecule." [GOC:jl]">GO:0043038</a></td> <td class="col-xs-6">amino acid activation</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/20998" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways by which the various amino acids become bonded to their corresponding tRNAs. The most common route for synthesis of aminoacyl tRNA is by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA and the alpha carboxylic acid group of an amino acid, usually catalyzed by the cognate aminoacyl-tRNA ligase. A given aminoacyl-tRNA ligase aminoacylates all species of an isoaccepting group of tRNA molecules." [GOC:ma, GOC:mah, MetaCyc:Aminoacyl-tRNAs]">GO:0043039</a></td> <td class="col-xs-6">tRNA aminoacylation</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/21105" data-toggle="tooltip" data-placement="top" title=""Interacting selectively and non-covalently with ions, charged atoms or groups of atoms." [GOC:jl]">GO:0043167</a></td> <td class="col-xs-6">ion binding</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/21106" data-toggle="tooltip" data-placement="top" title=""Interacting selectively and non-covalently with anions, charged atoms or groups of atoms with a net negative charge." [GOC:jl]">GO:0043168</a></td> <td class="col-xs-6">anion binding</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/21108" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways involving macromolecules, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass." [GOC:mah]">GO:0043170</a></td> <td class="col-xs-6">macromolecule metabolic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/21334" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways involving any oxoacid; an oxoacid is a compound which contains oxygen, at least one other element, and at least one hydrogen bound to oxygen, and which produces a conjugate base by loss of positive hydrogen ion(s) (hydrons)." [Wikipedia:Oxyacid]">GO:0043436</a></td> <td class="col-xs-6">oxoacid metabolic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/22082" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways by which individual cells transform chemical substances." [GOC:go_curators]">GO:0044237</a></td> <td class="col-xs-6">cellular metabolic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/22083" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways involving those compounds which are formed as a part of the normal anabolic and catabolic processes. These processes take place in most, if not all, cells of the organism." [GOC:go_curators, http://www.metacyc.org]">GO:0044238</a></td> <td class="col-xs-6">primary metabolic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/22111" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways involving small molecules, any low molecular weight, monomeric, non-encoded molecule." [GOC:curators, GOC:pde, GOC:vw]">GO:0044281</a></td> <td class="col-xs-6">small molecule metabolic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/23879" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways resulting in the formation of carboxylic acids, any organic acid containing one or more carboxyl (-COOH) groups." [ISBN:0198506732]">GO:0046394</a></td> <td class="col-xs-6">carboxylic acid biosynthetic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/23965" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways involving heterocyclic compounds, those with a cyclic molecular structure and at least two different atoms in the ring (or rings)." [ISBN:0198506732]">GO:0046483</a></td> <td class="col-xs-6">heterocycle metabolic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/26732" data-toggle="tooltip" data-placement="top" title=""Catalysis of the transfer of an alkylthio group from one compound (donor) to another (acceptor)." [GOC:ai]">GO:0050497</a></td> <td class="col-xs-6">alkylthioltransferase activity</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/27696" data-toggle="tooltip" data-placement="top" title=""Interacting selectively and non-covalently with an iron-sulfur cluster, a combination of iron and sulfur atoms." [GOC:ai]">GO:0051536</a></td> <td class="col-xs-6">iron-sulfur cluster binding</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/27700" data-toggle="tooltip" data-placement="top" title=""Interacting selectively and non-covalently with a cluster of atoms including both metal ions and nonmetal atoms, usually sulfur and oxygen. Examples include iron-sulfur clusters and nickel-iron-sulfur clusters." [GOC:jsg]">GO:0051540</a></td> <td class="col-xs-6">metal cluster binding</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/32846" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways involving an organic substance, any molecular entity containing carbon." [GOC:mah]">GO:0071704</a></td> <td class="col-xs-6">organic substance metabolic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/33444" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways resulting in the formation of monocarboxylic acids, any organic acid containing one carboxyl (-COOH) group." [GOC:mah]">GO:0072330</a></td> <td class="col-xs-6">monocarboxylic acid biosynthetic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/34756" data-toggle="tooltip" data-placement="top" title=""Any cellular metabolic process involving nucleic acids." [GOC:dph, GOC:tb]">GO:0090304</a></td> <td class="col-xs-6">nucleic acid metabolic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/35324" data-toggle="tooltip" data-placement="top" title=""Interacting selectively and non-covalently with an organic cyclic compound, any molecular entity that contains carbon arranged in a cyclic molecular structure." [GOC:sjw, PMID:7583672]">GO:0097159</a></td> <td class="col-xs-6">organic cyclic compound binding</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/35527" data-toggle="tooltip" data-placement="top" title=""Interacting selectively and non-covalently with a carbohydrate derivative." [GOC:pr]">GO:0097367</a></td> <td class="col-xs-6">carbohydrate derivative binding</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/38732" data-toggle="tooltip" data-placement="top" title=""Catalytic activity that acts to modify RNA." [GOC:molecular_function_refactoring, GOC:pdt]">GO:0140098</a></td> <td class="col-xs-6">catalytic activity, acting on RNA</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/38733" data-toggle="tooltip" data-placement="top" title=""Catalytic activity that acts to modify a tRNA." [GOC:molecular_function_refactoring, GOC:pdt]">GO:0140101</a></td> <td class="col-xs-6">catalytic activity, acting on a tRNA</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/38736" data-toggle="tooltip" data-placement="top" title=""Directly binding to a specific ion or molecule and delivering it either to an acceptor molecule or to a specific location." [GOC:molecular_function_refactoring, GOC:pdt]">GO:0140104</a></td> <td class="col-xs-6">molecular carrier activity</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/39083" data-toggle="tooltip" data-placement="top" title=""Binding to and carrying a protein between two different cellular locations by moving along with the target protein." [PMID:7628437]">GO:0140597</a></td> <td class="col-xs-6">protein carrier activity</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/40488" data-toggle="tooltip" data-placement="top" title=""Interacting selectively and non-covalently with nucleoside phosphate." [GOC:TermGenie]">GO:1901265</a></td> <td class="col-xs-6">nucleoside phosphate binding</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/40581" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways involving organic cyclic compound." [GOC:TermGenie]">GO:1901360</a></td> <td class="col-xs-6">organic cyclic compound metabolic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/40584" data-toggle="tooltip" data-placement="top" title=""Interacting selectively and non-covalently with heterocyclic compound." [GOC:TermGenie]">GO:1901363</a></td> <td class="col-xs-6">heterocyclic compound binding</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">Enrichment</td> </tr> </tbody> </table> </div> </div> <div class="tab-pane fade" id="tab3default"> <div class="table-responsive"> <table class="table table-striped table-fixed" id="interpro_table"> <thead> <tr> <th class="col-xs-3" data-sort="string-ins"><span class="sort-icon"></span><abbr title="Click to show help" href="/help/interpro_domain" data-target="#helpModal">InterPro domains</abbr></th> <th class="col-xs-5" data-sort="string-ins"><span class="sort-icon"></span>Description</th> <th class="col-xs-2" data-sort="int"><span class="sort-icon"></span>Start</th> <th class="col-xs-2" data-sort="int"><span class="sort-icon"></span>Stop</th> </tr> </thead> <tbody> <tr> <td class="col-xs-3"><a href="/interpro/view/11964">IPR014031</a></td> <td class="col-xs-5">Ketoacyl_synth_C</td> <td class="col-xs-2">243</td> <td class="col-xs-2">357</td> </tr> <tr> <td class="col-xs-3"><a href="/interpro/view/11963">IPR014030</a></td> <td class="col-xs-5">Ketoacyl_synth_N</td> <td class="col-xs-2">2</td> <td class="col-xs-2">235</td> </tr> </tbody> </table> </div> </div> </div> </div> </div> <div class="row"> <div class="col-lg-12 col-md-12 col-sm-12"> <div class="panel panel-default"> <div class="panel-heading" id="links">External Links</div> <div class="table-responsive"> <table class="table table-striped table-separated"> <tbody> <tr> <td><em>No external refs found!</em></td> </td> </tr> </tbody> </table> </div> </div> </div> </div> <div class="modal" id="profileModal" tabindex="-1" role="dialog" aria-labelledby="profileModalLabel"> <div class="modal-dialog" role="document" style="width:1000px;height:800px;"> <div class="modal-content"> </div> </div> </div> </div> </div> </div> <footer class="footer" id="footer"> <div class="container"> <div class="row"> <div class="col-xs-2"><strong class="text-muted"><a href="/features" class="text-muted">bacteria.guru</a></strong></div> <div class="col-xs-2"><a href="/about" class="text-muted">About</a></div> <div class="col-xs-2"><a href="/contact" class="text-muted">Contact</a></div> <div class="col-xs-2"><a href="/disclaimer" class="text-muted">Disclaimer</a></div> <div class="col-xs-2"><a href="/privacy" class="text-muted">Privacy policy</a></div> </div> </div> </footer> <div class="modal" id="helpModal" tabindex="-1" role="dialog" aria-labelledby="helpModalLabel"> <div class="modal-dialog" role="document" style="width:1000px;height:800px;"> <div class="modal-content"> </div> </div> </div> <div class="modal" id="loaderModal" tabindex="-1" role="dialog" aria-labelledby="loaderModalLabel"> <div class="modal-dialog" role="document" style="width:1000px;height:800px;"> <div class="modal-content"> <div class="modal-body"> <div id="leafy_loader"></div> <p class="text-center text-muted" id="leafy_loader_text">Loading ... please wait ... </p> <p class="text-center" id="leafy_loader_close_btn" style="display:none"><button type="button" class="btn btn-primary" data-dismiss="modal" style>Close</button></p> </div> </div> </div> </div> <script src="/static/js/jquery.min.js"></script> <script src="/static/js/bootstrap.min.js"></script> <script src="/static/js/stupidtable.min.js"></script> <script src="/static/js/TweenMax.min.js"></script> <script src="/static/js/jquery.qtip.min.js"></script> <script src="/static/js/planet_loader.js"></script> <script> function init_qtip() { $('.qtip_tooltip').each(function() { $(this).qtip({ content: { text: function(event, api) { $.ajax({ url: api.elements.target.attr('qtip_href') }) .then(function(content) { // Set the tooltip content upon successful retrieval api.set('content.text', content); 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