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  5. AGT25008

AGT25008 (N559_3352)


Aliases : N559_3352

Description : anaerobic dimethyl sulfoxide reductase subunit B [Ensembl]. 4Fe-4S dicluster domain, 4Fe-4S binding domain, iron-sulphur binding domain [InterProScan].


Gene families : OG_02_0000094 (OrthoFinder) Phylogenetic Tree(s): OG0000094_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT25008
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
AAC73981 dmsB, b0895 dimethyl sulfoxide reductase, anaerobic, subunit B... 0.09 OrthoFinder
AAC74661 ynfG, b1589 oxidoreductase, Fe-S subunit [Ensembl]. 4Fe-4S binding... 0.06 OrthoFinder
AAC74741 ydhX, b1671 putative 4Fe-4S ferridoxin-type protein; FNR, Nar,... 0.04 OrthoFinder
AAC74744 ydhY, b1674 putative 4Fe-4S ferridoxin-type protein; FNR, Nar,... 0.07 OrthoFinder
AAC75766 hycB, b2724 hydrogenase 3, Fe-S subunit [Ensembl]. 4Fe-4S dicluster... 0.04 OrthoFinder
AAC75924 ygfS, b2886 putative 4Fe-4S ferredoxin-type oxidoreductase subunit... 0.02 OrthoFinder
AAC76597 ysaA, b3573 putative hydrogenase, 4Fe-4S ferredoxin-type component... 0.07 OrthoFinder
AAC77042 nrfC, b4072 formate-dependent nitrite reductase, 4Fe4S subunit... 0.04 OrthoFinder
AAL19900 STM0965, dmsB anaerobic dimethyl sulfoxide reductase, subunit B... 0.1 OrthoFinder
AAL20416 STM1497 putative dimethyl sulphoxide reductase [Ensembl]. 4Fe-4S... 0.09 OrthoFinder
AAL20968 STM2064, phsB hydrogen sulfide production iron-sulfur subunit... 0.17 OrthoFinder
AAL21421 STM2527 putative polyferredoxin [Ensembl]. 4Fe-4S binding... 0.02 OrthoFinder
AAL21423 STM2529 putative anaerobic dimethylsulfoxide reductase... 0.07 OrthoFinder
AAL22525 STM3666, ysaA putative oxidoreductase [Ensembl]. 4Fe-4S dicluster... 0.04 OrthoFinder
AAL23103 STM4279, nrfC putative formate-dependent nitrite reductase [Ensembl].... 0.03 OrthoFinder
AAL23130 STM4306 putative anaerobic dimethyl sulfoxide reductase, subunit... 0.12 OrthoFinder
CCL18567 BN171_2440008 Putative oxidoreductase, Fe-S subunit [Ensembl]. 4Fe-4S... 0.02 OrthoFinder
EDJ91840 CGSHi22421_08793 anaerobic dimethyl sulfoxide reductase chain B... 0.03 OrthoFinder
EDJ91860 pyrH, CGSHi22421_08893 uridylate kinase [Ensembl]. 4Fe-4S dicluster domain... 0.04 OrthoFinder
KNA55266 VCV51_033079 4Fe-4S binding domain-containing protein [Ensembl].... 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Enrichment
BP GO:0001514 selenocysteine incorporation IEP Enrichment
MF GO:0003746 translation elongation factor activity IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
BP GO:0006063 uronic acid metabolic process IEP Enrichment
BP GO:0006064 glucuronate catabolic process IEP Enrichment
BP GO:0006091 generation of precursor metabolites and energy IEP Enrichment
BP GO:0006106 fumarate metabolic process IEP Enrichment
BP GO:0006414 translational elongation IEP Enrichment
BP GO:0006417 regulation of translation IEP Enrichment
BP GO:0006451 translational readthrough IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006766 vitamin metabolic process IEP Enrichment
BP GO:0006767 water-soluble vitamin metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0006824 cobalt ion transport IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
MF GO:0008927 mannonate dehydratase activity IEP Enrichment
MF GO:0008939 nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009060 aerobic respiration IEP Enrichment
BP GO:0009110 vitamin biosynthetic process IEP Enrichment
BP GO:0009235 cobalamin metabolic process IEP Enrichment
BP GO:0009236 cobalamin biosynthetic process IEP Enrichment
BP GO:0010608 posttranscriptional regulation of gene expression IEP Enrichment
MF GO:0015087 cobalt ion transmembrane transporter activity IEP Enrichment
BP GO:0015980 energy derivation by oxidation of organic compounds IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016763 pentosyltransferase activity IEP Enrichment
MF GO:0016852 sirohydrochlorin cobaltochelatase activity IEP Enrichment
MF GO:0016867 intramolecular transferase activity, transferring acyl groups IEP Enrichment
MF GO:0016993 precorrin-8X methylmutase activity IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
BP GO:0019251 anaerobic cobalamin biosynthetic process IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
BP GO:0019585 glucuronate metabolic process IEP Enrichment
BP GO:0019645 anaerobic electron transport chain IEP Enrichment
BP GO:0019646 aerobic electron transport chain IEP Enrichment
BP GO:0022900 electron transport chain IEP Enrichment
BP GO:0022904 respiratory electron transport chain IEP Enrichment
BP GO:0032268 regulation of cellular protein metabolic process IEP Enrichment
BP GO:0033013 tetrapyrrole metabolic process IEP Enrichment
BP GO:0033014 tetrapyrrole biosynthetic process IEP Enrichment
BP GO:0034248 regulation of cellular amide metabolic process IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Enrichment
MF GO:0043752 adenosylcobinamide kinase activity IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0044283 small molecule biosynthetic process IEP Enrichment
BP GO:0045333 cellular respiration IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
MF GO:0048472 threonine-phosphate decarboxylase activity IEP Enrichment
BP GO:0051246 regulation of protein metabolic process IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
CC GO:0070069 cytochrome complex IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR017896 4Fe4S_Fe-S-bd 59 153
IPR017896 4Fe4S_Fe-S-bd 12 25
No external refs found!