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  5. AGT25370

AGT25370 (N559_3732)


Aliases : N559_3732

Description : putative ribose ABC transport system ATP-binding component [Ensembl].


Gene families : OG_02_0000062 (OrthoFinder) Phylogenetic Tree(s): OG0000062_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT25370
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
AAC74586 lsrA, b1513 autoinducer 2 import ATP-binding protein [Ensembl]. ABC... 0.03 OrthoFinder
AAC75210 mglA, b2149 methyl-galactoside ABC transporter ATPase [Ensembl]. ABC... 0.09 OrthoFinder
AAC75600 yphE, b2547 putative sugar ABC transporter ATPase [Ensembl]. ABC... 0.03 OrthoFinder
AAC76772 rbsA, b3749 D-ribose ABC transporter ATPase [Ensembl]. ABC... 0.04 OrthoFinder
AAC77048 alsA, b4087 D-allose ABC transporter ATPase [Ensembl]. ABC... 0.04 OrthoFinder
AAL21093 STM2189, mglA galactose (methyl-galactoside) transport protein... 0.03 OrthoFinder
AAL22740 STM3882, rbsA D-ribose high-affinity transport protein [Ensembl]. ABC... 0.06 OrthoFinder
AAL22914 STM4074, ego putative ABC-type sugar aldose transport system... 0.03 OrthoFinder
AAT48244 ytfR, b4485 putative sugar ABC transporter ATPase [Ensembl]. ABC... 0.03 OrthoFinder
AGT23597 N559_1864 L-arabinose transporter ATP-binding protein [Ensembl]. 0.04 OrthoFinder
AGT26395 N559_4805 putative ABC transporter [Ensembl]. 0.04 OrthoFinder
AGT26647 N559_5070 rhamnose ABC transport system ATP-binding component [Ensembl]. 0.04 OrthoFinder
AKI49386 L2625_01486 sugar ABC transporter, ATP-binding protein [Ensembl].... 0.03 OrthoFinder
CCL17791 BN171_1800014 ABC-type transport system, sugar-family ATP-binding... 0.03 OrthoFinder
CCL18507 rbsA, BN171_240012 ABC-type transport system, ribose-specific ATP-binding... 0.04 OrthoFinder
CRN86529 araG Arabinose import ATP-binding protein AraG [Ensembl]. ABC... 0.07 OrthoFinder
EDJ91404 CGSHi22421_04853 fused methyl-galactoside transporter subunit of ABC... 0.08 OrthoFinder
EDJ91908 CGSHi22421_09133 D-xylose ABC transporter ATP-binding protein [Ensembl].... 0.09 OrthoFinder
KNA60663 VCV51_032102 ribose ABC transporter ATP-binding protein [Ensembl].... 0.05 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Enrichment
MF GO:0004565 beta-galactosidase activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0006012 galactose metabolic process IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0008643 carbohydrate transport IEP Enrichment
MF GO:0008982 protein-N(PI)-phosphohistidine-sugar phosphotransferase activity IEP Enrichment
BP GO:0009166 nucleotide catabolic process IEP Enrichment
CC GO:0009341 beta-galactosidase complex IEP Enrichment
BP GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system IEP Enrichment
MF GO:0015144 carbohydrate transmembrane transporter activity IEP Enrichment
MF GO:0015925 galactosidase activity IEP Enrichment
MF GO:0015926 glucosidase activity IEP Enrichment
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Enrichment
MF GO:0022804 active transmembrane transporter activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
BP GO:0034404 nucleobase-containing small molecule biosynthetic process IEP Enrichment
BP GO:0034655 nucleobase-containing compound catabolic process IEP Enrichment
BP GO:0044270 cellular nitrogen compound catabolic process IEP Enrichment
BP GO:0046434 organophosphate catabolic process IEP Enrichment
BP GO:0046700 heterocycle catabolic process IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:1901292 nucleoside phosphate catabolic process IEP Enrichment
BP GO:1901361 organic cyclic compound catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 285 442
IPR003439 ABC_transporter-like_ATP-bd 33 182
No external refs found!