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  5. AKI49477

AKI49477 (rpsT, L2625_01579)


Aliases : rpsT, L2625_01579

Description : ribosomal protein S20 [Ensembl]. Ribosomal protein S20 [Interproscan].


Gene families : OG_02_0000739 (OrthoFinder) Phylogenetic Tree(s): OG0000739_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AKI49477
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
AAC73134 rpsT, b0023 30S ribosomal subunit protein S20 [Ensembl]. Ribosomal... 0.07 OrthoFinder
AAK99544 spr0740, rpsT 30S Ribosomal protein subunit S20 [Ensembl]. Ribosomal... 0.06 OrthoFinder
AAL19007 STM0043, rpsT 30S ribosomal subunit protein S20 [Ensembl]. Ribosomal... 0.05 OrthoFinder
AEA94561 rpsT, OG1RF_11874 30S ribosomal protein S20 [Ensembl]. Ribosomal protein... 0.11 OrthoFinder
AHY40784 rpsT, CJ8421_08060 30S ribosomal protein S20 [Ensembl]. Ribosomal protein... 0.06 OrthoFinder
AKP14560 rpsT, WX61_00479 30S ribosomal protein S20 [Ensembl]. Ribosomal protein... 0.06 OrthoFinder
CPC82640 rpsT, ERS093114_01415 30S ribosomal protein S20 [Ensembl]. Ribosomal protein... 0.05 OrthoFinder
CRN65916 rpsT 30S ribosomal protein S20 [Ensembl]. Ribosomal protein... 0.04 OrthoFinder
KNA57452 VCV51_032842 ribosomal protein S20 [Ensembl]. Ribosomal protein S20... 0.06 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004017 adenylate kinase activity IEP Enrichment
MF GO:0004312 fatty acid synthase activity IEP Enrichment
MF GO:0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity IEP Enrichment
MF GO:0004358 glutamate N-acetyltransferase activity IEP Enrichment
MF GO:0004807 triose-phosphate isomerase activity IEP Enrichment
MF GO:0005342 organic acid transmembrane transporter activity IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
BP GO:0006526 arginine biosynthetic process IEP Enrichment
MF GO:0008028 monocarboxylic acid transmembrane transporter activity IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
MF GO:0008514 organic anion transmembrane transporter activity IEP Enrichment
MF GO:0008716 D-alanine-D-alanine ligase activity IEP Enrichment
BP GO:0009306 protein secretion IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
MF GO:0015225 biotin transmembrane transporter activity IEP Enrichment
BP GO:0015711 organic anion transport IEP Enrichment
BP GO:0015718 monocarboxylic acid transport IEP Enrichment
BP GO:0015849 organic acid transport IEP Enrichment
BP GO:0015878 biotin transport IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016776 phosphotransferase activity, phosphate group as acceptor IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0030154 cell differentiation IEP Enrichment
MF GO:0030170 pyridoxal phosphate binding IEP Enrichment
BP GO:0030435 sporulation resulting in formation of a cellular spore IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
BP GO:0032940 secretion by cell IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
BP GO:0035592 establishment of protein localization to extracellular region IEP Enrichment
MF GO:0042887 amide transmembrane transporter activity IEP Enrichment
BP GO:0043934 sporulation IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Enrichment
BP GO:0046903 secretion IEP Enrichment
BP GO:0046942 carboxylic acid transport IEP Enrichment
MF GO:0046943 carboxylic acid transmembrane transporter activity IEP Enrichment
BP GO:0048646 anatomical structure formation involved in morphogenesis IEP Enrichment
BP GO:0048869 cellular developmental process IEP Enrichment
MF GO:0050145 nucleoside monophosphate kinase activity IEP Enrichment
BP GO:0051180 vitamin transport IEP Enrichment
MF GO:0070279 vitamin B6 binding IEP Enrichment
BP GO:0071692 protein localization to extracellular region IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
MF GO:0090482 vitamin transmembrane transporter activity IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
BP GO:0140352 export from cell IEP Enrichment
InterPro domains Description Start Stop
IPR002583 Ribosomal_S20 2 82
No external refs found!