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  5. AKI49777

AKI49777 (rplT, L2625_01922)


Aliases : rplT, L2625_01922

Description : ribosomal protein L20 [Ensembl]. Ribosomal protein L20 [Interproscan].


Gene families : OG_02_0000432 (OrthoFinder) Phylogenetic Tree(s): OG0000432_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AKI49777
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
AAC74786 rplT, b1716 50S ribosomal subunit protein L20 [Ensembl]. Ribosomal... 0.12 OrthoFinder
AAL20261 STM1336, rplT 50S ribosomal subunit protein L20 [Ensembl]. Ribosomal... 0.12 OrthoFinder
ADK87005 rplT, MPNE_0135 ribosomal protein L20 [Ensembl]. Ribosomal protein L20... 0.11 OrthoFinder
AEA93330 rplT, OG1RF_10643 50S ribosomal protein L20 [Ensembl]. Ribosomal protein... 0.16 OrthoFinder
AHY39505 rplT, CJ8421_01210 50S ribosomal protein L20 [Ensembl]. Ribosomal protein... 0.04 OrthoFinder
AKP15673 rplT, WX61_01636 50S ribosomal protein L20 [Ensembl]. Ribosomal protein... 0.04 OrthoFinder
CCG26517 No alias LSU ribosomal protein L20p [Ensembl]. Ribosomal protein... 0.1 OrthoFinder
CCP44408 rplT, Rv1643 50S ribosomal protein L20 RplT [Ensembl]. Ribosomal... 0.06 OrthoFinder
CPC85832 rplT, ERS093114_01500 50S ribosomal protein L20 [Ensembl]. Ribosomal protein... 0.2 OrthoFinder
CRO66872 rplT 50S ribosomal protein L20 [Ensembl]. Ribosomal protein... 0.13 OrthoFinder
KNA52216 VCV51_033474 ribosomal protein L20 [Ensembl]. Ribosomal protein L20... 0.05 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
MF GO:0019843 rRNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004017 adenylate kinase activity IEP Enrichment
MF GO:0004312 fatty acid synthase activity IEP Enrichment
MF GO:0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity IEP Enrichment
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Enrichment
MF GO:0004810 tRNA adenylyltransferase activity IEP Enrichment
MF GO:0005342 organic acid transmembrane transporter activity IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
MF GO:0008028 monocarboxylic acid transmembrane transporter activity IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
MF GO:0008514 organic anion transmembrane transporter activity IEP Enrichment
MF GO:0008716 D-alanine-D-alanine ligase activity IEP Enrichment
BP GO:0009306 protein secretion IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
MF GO:0009982 pseudouridine synthase activity IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
MF GO:0015225 biotin transmembrane transporter activity IEP Enrichment
BP GO:0015711 organic anion transport IEP Enrichment
BP GO:0015718 monocarboxylic acid transport IEP Enrichment
BP GO:0015849 organic acid transport IEP Enrichment
BP GO:0015878 biotin transport IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
BP GO:0032940 secretion by cell IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
BP GO:0035592 establishment of protein localization to extracellular region IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
MF GO:0042887 amide transmembrane transporter activity IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0046903 secretion IEP Enrichment
BP GO:0046942 carboxylic acid transport IEP Enrichment
MF GO:0046943 carboxylic acid transmembrane transporter activity IEP Enrichment
MF GO:0051499 D-aminoacyl-tRNA deacylase activity IEP Enrichment
BP GO:0071692 protein localization to extracellular region IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
BP GO:0140352 export from cell IEP Enrichment
MF GO:1990817 RNA adenylyltransferase activity IEP Enrichment
InterPro domains Description Start Stop
IPR005813 Ribosomal_L20 3 109
No external refs found!