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  5. AKI50068

AKI50068 (L2625_02223)


Aliases : L2625_02223

Description : ABC transporter, ATP-binding protein [Ensembl]. ABC transporter-like, ABC-transporter extension domain, ABC transporter Uup [Interproscan].


Gene families : OG_02_0000030 (OrthoFinder) Phylogenetic Tree(s): OG0000030_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AKI50068
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
AAK99482 spr0678, ABC-NBD ABC transporter ATP-binding protein-unknown substrate... 0.06 OrthoFinder
AAK99825 spr1021, ABC-NBD ABC transporter ATP-binding protein-unknown substrate... 0.05 OrthoFinder
AAL00216 spr1412, ABC-NBD ABC transporter ATP-binding protein-unknown substrate... 0.04 OrthoFinder
AAL19995 STM1062, uup putative ATPase component of ABC transporter [Ensembl].... 0.03 OrthoFinder
AAL22322 STM3459, yheS putative ATPase component of ABC transporter [Ensembl].... 0.03 OrthoFinder
AEA94698 OG1RF_12011 ABC superfamily ATP binding cassette transporter, ABC... 0.04 OrthoFinder
AHY39682 CJ8421_02135 ABC transporter ATP-binding protein [Ensembl]. ABC... 0.03 OrthoFinder
CCG26162 No alias COG0488: ATPase components of ABC transporters with... 0.05 OrthoFinder
CCG26385 No alias ABC transporter ATP-binding protein uup [Ensembl]. ABC... 0.05 OrthoFinder
CCL17577 BN171_1590001 ABC-type transport system, ATP-binding protein... 0.04 OrthoFinder
CCL19055 BN171_2840003 ABC-type transport system,pristinamycin/multidrug-family... 0.04 OrthoFinder
CCP45271 Rv2477c Probable macrolide-transport ATP-binding protein ABC... 0.02 OrthoFinder
CRO90899 uup ABC transporter ATP-binding protein uup [Ensembl]. ABC... 0.03 OrthoFinder
CRP46393 yheS_2 putative ABC transporter ATP-binding protein YheS... 0.04 OrthoFinder
KNA55290 VCV51_033103 ABC transporter ATP-binding protein [Ensembl]. ABC... 0.03 OrthoFinder
KNA57470 VCV51_030455 ABC transporter ATP-binding protein [Ensembl]. ABC... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000921 septin ring assembly IEP Enrichment
MF GO:0003678 DNA helicase activity IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003909 DNA ligase activity IEP Enrichment
MF GO:0003911 DNA ligase (NAD+) activity IEP Enrichment
MF GO:0004347 glucose-6-phosphate isomerase activity IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
MF GO:0004476 mannose-6-phosphate isomerase activity IEP Enrichment
CC GO:0005856 cytoskeleton IEP Enrichment
CC GO:0005940 septin ring IEP Enrichment
BP GO:0006081 cellular aldehyde metabolic process IEP Enrichment
BP GO:0006090 pyruvate metabolic process IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006282 regulation of DNA repair IEP Enrichment
BP GO:0006310 DNA recombination IEP Enrichment
BP GO:0006450 regulation of translational fidelity IEP Enrichment
BP GO:0006644 phospholipid metabolic process IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
BP GO:0007010 cytoskeleton organization IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
MF GO:0008312 7S RNA binding IEP Enrichment
BP GO:0008654 phospholipid biosynthetic process IEP Enrichment
BP GO:0009240 isopentenyl diphosphate biosynthetic process IEP Enrichment
CC GO:0009295 nucleoid IEP Enrichment
MF GO:0009378 four-way junction helicase activity IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016726 oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016860 intramolecular oxidoreductase activity IEP Enrichment
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Enrichment
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Enrichment
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEP Enrichment
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Enrichment
BP GO:0031106 septin ring organization IEP Enrichment
CC GO:0032156 septin cytoskeleton IEP Enrichment
BP GO:0032185 septin cytoskeleton organization IEP Enrichment
BP GO:0032787 monocarboxylic acid metabolic process IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
BP GO:0046490 isopentenyl diphosphate metabolic process IEP Enrichment
MF GO:0046983 protein dimerization activity IEP Enrichment
CC GO:0048500 signal recognition particle IEP Enrichment
BP GO:0048583 regulation of response to stimulus IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
BP GO:0050992 dimethylallyl diphosphate biosynthetic process IEP Enrichment
BP GO:0050993 dimethylallyl diphosphate metabolic process IEP Enrichment
BP GO:0051052 regulation of DNA metabolic process IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
MF GO:0051745 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
BP GO:0070925 organelle assembly IEP Enrichment
BP GO:0080134 regulation of response to stress IEP Enrichment
BP GO:0080135 regulation of cellular response to stress IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
BP GO:2001020 regulation of response to DNA damage stimulus IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 348 477
IPR032781 ABC_tran_Xtn 234 317
IPR032524 ABC_tran_C 577 645
IPR003439 ABC_transporter-like_ATP-bd 19 195
No external refs found!