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  5. AKI50565

AKI50565 (rplW, L2625_02775)


Aliases : rplW, L2625_02775

Description : ribosomal protein L23 [Ensembl]. Ribosomal protein L25/L23 [Interproscan].


Gene families : OG_02_0000400 (OrthoFinder) Phylogenetic Tree(s): OG0000400_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AKI50565
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
AAC76343 rplW, b3318 50S ribosomal subunit protein L23 [Ensembl]. Ribosomal... 0.05 OrthoFinder
AAK98994 spr0190, rplW 50S Ribosomal protein L23 [Ensembl]. Ribosomal protein... 0.07 OrthoFinder
AAL22301 STM3438, rplW 50S ribosomal subunit protein L23 [Ensembl]. Ribosomal... 0.04 OrthoFinder
ADK86872 rplW, MPNE_0196 ribosomal protein L23 [Ensembl]. Ribosomal protein L23... 0.04 OrthoFinder
AEA92840 rplW, OG1RF_10153 50S ribosomal protein L23 [Ensembl]. Ribosomal protein... 0.08 OrthoFinder
AGT22246 N559_0436 rpL23-SA fusion protein [Ensembl]. 0.04 OrthoFinder
AHY40890 rplW, CJ8421_08590 50S ribosomal protein L23 [Ensembl]. Ribosomal protein... 0.04 OrthoFinder
AKP15125 rplW, WX61_01071 50S ribosomal protein L23 [Ensembl]. Ribosomal protein... 0.03 OrthoFinder
CBI65719 rplW, HPB8_162 large subunit ribosomal protein L23 [Ensembl]. Ribosomal... 0.03 OrthoFinder
CCG27381 L23Ae LSU ribosomal protein L23p (L23Ae) [Ensembl]. Ribosomal... 0.06 OrthoFinder
CCL20565 rplW, BN171_70005 50S ribosomal protein L23 [Ensembl]. Ribosomal protein... 0.07 OrthoFinder
CCP43447 rplW, Rv0703 50S ribosomal protein L23 RplW [Ensembl]. Ribosomal... 0.05 OrthoFinder
CPD13571 rplW, ERS093114_02124 50S ribosomal protein L23 [Ensembl]. Ribosomal protein... 0.06 OrthoFinder
CRO73798 rplW 50S ribosomal protein L23 [Ensembl]. Ribosomal protein... 0.05 OrthoFinder
EDJ91356 rplW, CGSHi22421_04613 50S ribosomal protein L23 [Ensembl]. Ribosomal protein... 0.06 OrthoFinder
KNA54974 VCV51_033157 ribosomal protein L23 [Ensembl]. Ribosomal protein L23... 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
BP GO:0002949 tRNA threonylcarbamoyladenosine modification IEP Enrichment
MF GO:0004107 chorismate synthase activity IEP Enrichment
MF GO:0004478 methionine adenosyltransferase activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
CC GO:0033573 high-affinity iron permease complex IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0034755 iron ion transmembrane transport IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043138 3'-5' DNA helicase activity IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0046500 S-adenosylmethionine metabolic process IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
MF GO:0070402 NADPH binding IEP Enrichment
BP GO:0070525 tRNA threonylcarbamoyladenosine metabolic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
CC GO:1905862 ferroxidase complex IEP Enrichment
CC GO:1990204 oxidoreductase complex IEP Enrichment
InterPro domains Description Start Stop
IPR013025 Ribosomal_L25/23 5 87
No external refs found!