ADK87112 (MPNE_0411)

Aliases : MPNE_0411

Description : RNA methyltransferase, TrmH family, group 3 [Ensembl]. SpoU rRNA Methylase family, RNA 2'-O ribose methyltransferase substrate binding [Interproscan].

Gene families : OG_02_0000169 (OrthoFinder) Phylogenetic Tree(s): OG0000169_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: ADK87112
Cluster	HCAA: Cluster_1

Target	Alias	Description	ECC score	Gene Family Method
AAC77137	rlmB, b4180	23S rRNA mG2251 2'-O-ribose methyltransferase,...	0.02	OrthoFinder
AEA92733	OG1RF_10046	RNA methyltransferase [Ensembl]. SpoU rRNA Methylase...	0.03	OrthoFinder
AKP16020	rlmB_1, WX61_01993	23S rRNA (guanosine-2'-O-)-methyltransferase RlmB...	0.03	OrthoFinder
CCL20534	BN171_60025	Putative tRNA/rRNA methyltransferase, TrmH family,...	0.03	OrthoFinder
CCL20696	BN171_930007	Putative tRNA/rRNA methyltransferase, SpoU [Ensembl]....	0.03	OrthoFinder
CCP46402	Rv3579c	Possible tRNA/rRNA methyltransferase [Ensembl]. SpoU...	0.01	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008168	methyltransferase activity	IEA	Interproscan
MF	GO:0008173	RNA methyltransferase activity	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016741	transferase activity, transferring one-carbon groups	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	Enrichment
BP	GO:0016043	cellular component organization	IEP	Enrichment
MF	GO:0016874	ligase activity	IEP	Enrichment
MF	GO:0017076	purine nucleotide binding	IEP	Enrichment
MF	GO:0032553	ribonucleotide binding	IEP	Enrichment
MF	GO:0032555	purine ribonucleotide binding	IEP	Enrichment
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Enrichment
MF	GO:0036094	small molecule binding	IEP	Enrichment
MF	GO:0043167	ion binding	IEP	Enrichment
MF	GO:0043168	anion binding	IEP	Enrichment
MF	GO:0097367	carbohydrate derivative binding	IEP	Enrichment
MF	GO:1901265	nucleoside phosphate binding	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR013123	SpoU_subst-bd	7	74
IPR001537	SpoU_MeTrfase	94	166

External Links

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ADK87112 (MPNE_0411)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation